Package - libtfbs-perl

Package:  libtfbs-perl
apt-get install libtfbs-perl
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/libt/libtfbs-perl/libtfbs-perl_0.7.1+ds-4+b1_amd64.deb (Size: 216.4KiB)

PropertyValue
Packagelibtfbs-perl
Sourcelibtfbs-perl (0.7.1+ds-4)
Version0.7.1+ds-4+b1
Installed-Size981
MaintainerDebian Med Packaging Team
Architectureamd64
Dependsperl (>= 5.40.0-6), perlapi-5.40.0, pdl (>= 1:2.093-1+b1), pdlapi-20, libc6 (>= 2.38), bioperl, libwww-perl, libdbi-perl
Recommendslibgd-gd2-perl | libgd-gd2-noxpm-perl
Descriptionscanning DNA sequence with a position weight matrix
Description-md5329310953f967bb54344ec3b1c418600
Homepagehttp://tfbs.genereg.net
Tagdevel::lang:perl, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, implemented-in::perl, interface::commandline, role::devel-lib, role::program
Sectionperl
Priorityoptional
Filenamepool/main/libt/libtfbs-perl/libtfbs-perl_0.7.1+ds-4+b1_amd64.deb
Size221608
MD5sum7292d9f83e62d69aa09181f7999d825b
SHA256c90035c3c6a0544a25c8b4eb19f344568c9b0379a36287c263038d4bbc5c473e

Files in package

  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/ConservationProfile.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/FlatFileDir.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/JASPAR.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/JASPAR2.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/JASPAR4.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/JASPAR5.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/JASPAR6.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/JASPAR7.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/LocalTRANSFAC.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/DB/TRANSFAC.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Ext/pwmsearch.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Matrix.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Matrix/Alignment.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Matrix/ICM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Matrix/PFM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Matrix/PWM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Matrix/_Alignment.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/MatrixSet.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/AnnSpec.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/AnnSpec/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/Elph.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/Elph/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/Gibbs.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/Gibbs/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/MEME.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/MEME/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/Motif/Matrix.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/Motif/Word.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/SimplePFM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/YMF.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGen/YMF/Motif.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternGenI.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/PatternI.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/README.md
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Run/ConservationProfileGenerator.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Site.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/SitePair.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/SitePairSet.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/SiteSet.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/TFFM.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Tools/SetOperations.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Word.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/Word/Consensus.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/_Iterator.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/_Iterator/_MatrixSetIterator.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/TFBS/_Iterator/_SiteSetIterator.pm
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/TFBS/Ext/pwmsearch/pwmsearch.bundle
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/auto/TFBS/Ext/pwmsearch/pwmsearch.so
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/pwm_search.h
  • /usr/lib/x86_64-linux-gnu/perl5/5.40/pwm_searchPFF.c
  • /usr/share/doc/libtfbs-perl/README.Debian
  • /usr/share/doc/libtfbs-perl/changelog.Debian.amd64.gz
  • /usr/share/doc/libtfbs-perl/changelog.Debian.gz
  • /usr/share/doc/libtfbs-perl/changelog.gz
  • /usr/share/doc/libtfbs-perl/copyright
  • /usr/share/doc/libtfbs-perl/examples/Ext/t/pwmsearch.t
  • /usr/share/doc/libtfbs-perl/examples/Ext/t/test.fa
  • /usr/share/doc/libtfbs-perl/examples/t/01_Matrix.t
  • /usr/share/doc/libtfbs-perl/examples/t/02_Search.t
  • /usr/share/doc/libtfbs-perl/examples/t/03_DB_FlatFileDir.t
  • /usr/share/doc/libtfbs-perl/examples/t/04_DB_TRANSFAC.t
  • /usr/share/doc/libtfbs-perl/examples/t/05_DB_JASPAR.t
  • /usr/share/doc/libtfbs-perl/examples/t/06_SimplePFM.t
  • /usr/share/doc/libtfbs-perl/examples/t/07_AnnSpec.t
  • /usr/share/doc/libtfbs-perl/examples/t/07_Elph.t
  • /usr/share/doc/libtfbs-perl/examples/t/07_Gibbs.t
  • /usr/share/doc/libtfbs-perl/examples/t/07_MEME.t
  • /usr/share/doc/libtfbs-perl/examples/t/08_DB_LocalTRANSFAC.t
  • /usr/share/doc/libtfbs-perl/examples/t/09_Word_Consensus.t
  • /usr/share/doc/libtfbs-perl/examples/t/10_Tools_SetOperations.t
  • /usr/share/doc/libtfbs-perl/examples/t/test.aln
  • /usr/share/doc/libtfbs-perl/examples/t/test.fa
  • /usr/share/doc/libtfbs-perl/examples/t/test.gibbin
  • /usr/share/doc/libtfbs-perl/examples/t/test_meme.fa
  • /usr/share/doc/libtfbs-perl/examples/t/transfac_new/matrix.dat
  • /usr/share/doc/libtfbs-perl/examples/t/transfac_old/matrix.dat
  • /usr/share/lintian/overrides/libtfbs-perl
  • /usr/share/man/man3/TFBS::DB::FlatFileDir.3pm.gz
  • /usr/share/man/man3/TFBS::DB::JASPAR.3pm.gz
  • /usr/share/man/man3/TFBS::DB::JASPAR2.3pm.gz
  • /usr/share/man/man3/TFBS::DB::JASPAR4.3pm.gz
  • /usr/share/man/man3/TFBS::DB::JASPAR5.3pm.gz
  • /usr/share/man/man3/TFBS::DB::JASPAR6.3pm.gz
  • /usr/share/man/man3/TFBS::DB::JASPAR7.3pm.gz
  • /usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm.gz
  • /usr/share/man/man3/TFBS::DB::TRANSFAC.3pm.gz
  • /usr/share/man/man3/TFBS::Ext::pwmsearch.3pm.gz
  • /usr/share/man/man3/TFBS::Matrix.3pm.gz
  • /usr/share/man/man3/TFBS::Matrix::Alignment.3pm.gz
  • /usr/share/man/man3/TFBS::Matrix::ICM.3pm.gz
  • /usr/share/man/man3/TFBS::Matrix::PFM.3pm.gz
  • /usr/share/man/man3/TFBS::Matrix::PWM.3pm.gz
  • /usr/share/man/man3/TFBS::MatrixSet.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::Elph.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::MEME.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::YMF.3pm.gz
  • /usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm.gz
  • /usr/share/man/man3/TFBS::PatternI.3pm.gz
  • /usr/share/man/man3/TFBS::Site.3pm.gz
  • /usr/share/man/man3/TFBS::SitePair.3pm.gz
  • /usr/share/man/man3/TFBS::SitePairSet.3pm.gz
  • /usr/share/man/man3/TFBS::SiteSet.3pm.gz
  • /usr/share/man/man3/TFBS::TFFM.3pm.gz
  • /usr/share/man/man3/TFBS::Word.3pm.gz
  • /usr/share/man/man3/TFBS::Word::Consensus.3pm.gz