Package - libmaus2-dev

Package: libmaus2-dev
apt-get install libmaus2-dev

Documentations in package:

libmaus2-dev

Primary informations

Download package: http://deb.debian.org/debian/pool/main/libm/libmaus2/libmaus2-dev_2.0.813+ds-4_amd64.deb (Size: 4.5MiB)

Property	Value
Package	libmaus2-dev
Source	libmaus2
Version	2.0.813+ds-4
Installed-Size	72784
Maintainer	Debian Med Packaging Team
Architecture	amd64
Depends	libmaus2-2 (= 2.0.813+ds-4), zlib1g-dev
Description	collection of data structures and algorithms for biobambam (devel)
Description-md5	5985b8355d85114b571b6940b393017d
Homepage	https://gitlab.com/german.tischler/libmaus2
Built-Using	libsecrecy (= 0.0.5+ds-4)
Tag	devel::library, role::devel-lib
Section	libdevel
Priority	optional
Filename	pool/main/libm/libmaus2/libmaus2-dev_2.0.813+ds-4_amd64.deb
Size	4687684
MD5sum	3cf2575042ed983684ceba8753e028ab
SHA256	0f9b2584a0ff64e07188f402dcbda31b4e19b92d0cc1d638d6e8770677c8c104

Files in package

/usr/include/libmaus2/LibMausConfig.hpp
/usr/include/libmaus2/LibMausWindows.hpp
/usr/include/libmaus2/aio/ArrayFile.hpp
/usr/include/libmaus2/aio/ArrayFileContainer.hpp
/usr/include/libmaus2/aio/ArrayFileSet.hpp
/usr/include/libmaus2/aio/ArrayInputStream.hpp
/usr/include/libmaus2/aio/ArrayInputStreamBuffer.hpp
/usr/include/libmaus2/aio/ArrayInputStreamFactory.hpp
/usr/include/libmaus2/aio/Buffer.hpp
/usr/include/libmaus2/aio/BufferedOutput.hpp
/usr/include/libmaus2/aio/CharArrayInputStream.hpp
/usr/include/libmaus2/aio/CharArrayInputStreamBuffer.hpp
/usr/include/libmaus2/aio/CharArrayOutputStream.hpp
/usr/include/libmaus2/aio/CharArrayOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/CircularBuffer.hpp
/usr/include/libmaus2/aio/CircularWrapper.hpp
/usr/include/libmaus2/aio/CompactDecoder4.hpp
/usr/include/libmaus2/aio/CompactEncoder4.hpp
/usr/include/libmaus2/aio/ConcatInputStream.hpp
/usr/include/libmaus2/aio/ConcatInputStreamBuffer.hpp
/usr/include/libmaus2/aio/CountOutputStream.hpp
/usr/include/libmaus2/aio/CountOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/DebugLineOutputStream.hpp
/usr/include/libmaus2/aio/DebugLineOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/FStreamInputOutputStreamFactory.hpp
/usr/include/libmaus2/aio/FileFragment.hpp
/usr/include/libmaus2/aio/FileRemoval.hpp
/usr/include/libmaus2/aio/GenericPeeker.hpp
/usr/include/libmaus2/aio/GetLength.hpp
/usr/include/libmaus2/aio/IFStreamInputStreamFactory.hpp
/usr/include/libmaus2/aio/IStreamWrapper.hpp
/usr/include/libmaus2/aio/InputOutputStream.hpp
/usr/include/libmaus2/aio/InputOutputStreamFactory.hpp
/usr/include/libmaus2/aio/InputOutputStreamFactoryContainer.hpp
/usr/include/libmaus2/aio/InputOutputStreamInstance.hpp
/usr/include/libmaus2/aio/InputOutputStreamPointerWrapper.hpp
/usr/include/libmaus2/aio/InputOutputStreamWrapper.hpp
/usr/include/libmaus2/aio/InputStream.hpp
/usr/include/libmaus2/aio/InputStreamFactory.hpp
/usr/include/libmaus2/aio/InputStreamFactoryContainer.hpp
/usr/include/libmaus2/aio/InputStreamInstance.hpp
/usr/include/libmaus2/aio/InputStreamInstanceAtOffset.hpp
/usr/include/libmaus2/aio/InputStreamObject.hpp
/usr/include/libmaus2/aio/InputStreamObjectAllocator.hpp
/usr/include/libmaus2/aio/InputStreamObjectTypeInfo.hpp
/usr/include/libmaus2/aio/InputStreamPointerWrapper.hpp
/usr/include/libmaus2/aio/InputStreamWrapper.hpp
/usr/include/libmaus2/aio/LineSplittingPosixFdOutputStream.hpp
/usr/include/libmaus2/aio/LineSplittingPosixFdOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/MemoryBackedOutputStream.hpp
/usr/include/libmaus2/aio/MemoryBackedOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/MemoryFile.hpp
/usr/include/libmaus2/aio/MemoryFileAdapter.hpp
/usr/include/libmaus2/aio/MemoryFileContainer.hpp
/usr/include/libmaus2/aio/MemoryInputOutputStream.hpp
/usr/include/libmaus2/aio/MemoryInputOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/MemoryInputOutputStreamFactory.hpp
/usr/include/libmaus2/aio/MemoryInputStream.hpp
/usr/include/libmaus2/aio/MemoryInputStreamBuffer.hpp
/usr/include/libmaus2/aio/MemoryInputStreamFactory.hpp
/usr/include/libmaus2/aio/MemoryOutputStream.hpp
/usr/include/libmaus2/aio/MemoryOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/MemoryOutputStreamFactory.hpp
/usr/include/libmaus2/aio/NamedTemporaryFile.hpp
/usr/include/libmaus2/aio/NamedTemporaryFileAllocator.hpp
/usr/include/libmaus2/aio/NamedTemporaryFileTypeInfo.hpp
/usr/include/libmaus2/aio/OFStreamOutputStreamFactory.hpp
/usr/include/libmaus2/aio/OutputStream.hpp
/usr/include/libmaus2/aio/OutputStreamFactory.hpp
/usr/include/libmaus2/aio/OutputStreamFactoryContainer.hpp
/usr/include/libmaus2/aio/OutputStreamInstance.hpp
/usr/include/libmaus2/aio/OutputStreamInstanceArray.hpp
/usr/include/libmaus2/aio/OutputStreamPointerWrapper.hpp
/usr/include/libmaus2/aio/OutputStreamWrapper.hpp
/usr/include/libmaus2/aio/PairFileDecoder.hpp
/usr/include/libmaus2/aio/PosixFdInput.hpp
/usr/include/libmaus2/aio/PosixFdInputOutputStream.hpp
/usr/include/libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/PosixFdInputOutputStreamFactory.hpp
/usr/include/libmaus2/aio/PosixFdInputStream.hpp
/usr/include/libmaus2/aio/PosixFdInputStreamBuffer.hpp
/usr/include/libmaus2/aio/PosixFdInputStreamFactory.hpp
/usr/include/libmaus2/aio/PosixFdInputWrapper.hpp
/usr/include/libmaus2/aio/PosixFdOutputStream.hpp
/usr/include/libmaus2/aio/PosixFdOutputStreamBuffer.hpp
/usr/include/libmaus2/aio/PosixFdOutputStreamFactory.hpp
/usr/include/libmaus2/aio/PutOutputIterator.hpp
/usr/include/libmaus2/aio/ReorderConcatGenericInput.hpp
/usr/include/libmaus2/aio/SecrecyCache.hpp
/usr/include/libmaus2/aio/SecrecyInputStreamFactory.hpp
/usr/include/libmaus2/aio/SecrecyOutputStreamFactory.hpp
/usr/include/libmaus2/aio/SerialisedPeeker.hpp
/usr/include/libmaus2/aio/SingleFileFragmentMerge.hpp
/usr/include/libmaus2/aio/SizeMonitorThread.hpp
/usr/include/libmaus2/aio/SkipConcatInputStream.hpp
/usr/include/libmaus2/aio/SkipConcatInputStreamBuffer.hpp
/usr/include/libmaus2/aio/SplitWriter.hpp
/usr/include/libmaus2/aio/StreamLock.hpp
/usr/include/libmaus2/aio/SynchronousFastReaderBase.hpp
/usr/include/libmaus2/aio/SynchronousGenericInput.hpp
/usr/include/libmaus2/aio/SynchronousGenericOutput.hpp
/usr/include/libmaus2/aio/TempFileArray.hpp
/usr/include/libmaus2/aio/URLObject.hpp
/usr/include/libmaus2/aio/WriteCompactArray.hpp
/usr/include/libmaus2/alignment/BamLineInfo.hpp
/usr/include/libmaus2/alignment/FMIIntervalComparator.hpp
/usr/include/libmaus2/alignment/FactorMatchInfo.hpp
/usr/include/libmaus2/alignment/FactorMatchInfoPosComparator.hpp
/usr/include/libmaus2/alignment/KmerInfo.hpp
/usr/include/libmaus2/alignment/KmerTuple.hpp
/usr/include/libmaus2/alignment/SimpleLocalAligner.hpp
/usr/include/libmaus2/arch/CacheLineSize.hpp
/usr/include/libmaus2/arch/I386Features.hpp
/usr/include/libmaus2/arch/PageSize.hpp
/usr/include/libmaus2/autoarray/AutoArray.hpp
/usr/include/libmaus2/autoarray/AutoArray2d.hpp
/usr/include/libmaus2/autoarray/AutoArrayAllocType.hpp
/usr/include/libmaus2/autoarray/AutoArrayMultiMap.hpp
/usr/include/libmaus2/avl/AVLSet.hpp
/usr/include/libmaus2/avl/AtomicAVLMap.hpp
/usr/include/libmaus2/avl/AtomicAVLPtrValueMap.hpp
/usr/include/libmaus2/avl/AtomicAVLSet.hpp
/usr/include/libmaus2/bambam/AdapterFilter.hpp
/usr/include/libmaus2/bambam/AdapterOffsetStrand.hpp
/usr/include/libmaus2/bambam/AlignmentValidity.hpp
/usr/include/libmaus2/bambam/BamAccessor.hpp
/usr/include/libmaus2/bambam/BamAlignment.hpp
/usr/include/libmaus2/bambam/BamAlignmentComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentDecoder.hpp
/usr/include/libmaus2/bambam/BamAlignmentDecoderBase.hpp
/usr/include/libmaus2/bambam/BamAlignmentDecoderFactory.hpp
/usr/include/libmaus2/bambam/BamAlignmentDecoderInfo.hpp
/usr/include/libmaus2/bambam/BamAlignmentEncoderBase.hpp
/usr/include/libmaus2/bambam/BamAlignmentExpungeCallback.hpp
/usr/include/libmaus2/bambam/BamAlignmentFilter.hpp
/usr/include/libmaus2/bambam/BamAlignmentFixedSizeData.hpp
/usr/include/libmaus2/bambam/BamAlignmentFreeList.hpp
/usr/include/libmaus2/bambam/BamAlignmentHashComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentHeapComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentInputCallbackBam.hpp
/usr/include/libmaus2/bambam/BamAlignmentInputCallbackSnappy.hpp
/usr/include/libmaus2/bambam/BamAlignmentInputPositionCallbackNull.hpp
/usr/include/libmaus2/bambam/BamAlignmentInputPositionUpdateCallback.hpp
/usr/include/libmaus2/bambam/BamAlignmentListNode.hpp
/usr/include/libmaus2/bambam/BamAlignmentNameComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentNameHIComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentNameLexicographicComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentPairFreeList.hpp
/usr/include/libmaus2/bambam/BamAlignmentPairListNode.hpp
/usr/include/libmaus2/bambam/BamAlignmentPosComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentPrinter.hpp
/usr/include/libmaus2/bambam/BamAlignmentReadGroupFilter.hpp
/usr/include/libmaus2/bambam/BamAlignmentReg2Bin.hpp
/usr/include/libmaus2/bambam/BamAlignmentSnappyInput.hpp
/usr/include/libmaus2/bambam/BamAlignmentSortingCircularHashEntryOverflow.hpp
/usr/include/libmaus2/bambam/BamAlignmentTagComparator.hpp
/usr/include/libmaus2/bambam/BamAlignmentTagOnlyComparator.hpp
/usr/include/libmaus2/bambam/BamAuxFilterVector.hpp
/usr/include/libmaus2/bambam/BamAuxSortingBuffer.hpp
/usr/include/libmaus2/bambam/BamAuxSortingBufferEntry.hpp
/usr/include/libmaus2/bambam/BamBlockWriterBase.hpp
/usr/include/libmaus2/bambam/BamBlockWriterBaseFactory.hpp
/usr/include/libmaus2/bambam/BamCat.hpp
/usr/include/libmaus2/bambam/BamCatHeader.hpp
/usr/include/libmaus2/bambam/BamDecoder.hpp
/usr/include/libmaus2/bambam/BamDefaultAdapters.hpp
/usr/include/libmaus2/bambam/BamEntryContainer.hpp
/usr/include/libmaus2/bambam/BamFlagBase.hpp
/usr/include/libmaus2/bambam/BamFormatAuxiliary.hpp
/usr/include/libmaus2/bambam/BamHeader.hpp
/usr/include/libmaus2/bambam/BamHeaderLowMem.hpp
/usr/include/libmaus2/bambam/BamHeaderParserState.hpp
/usr/include/libmaus2/bambam/BamHeaderParserStateBase.hpp
/usr/include/libmaus2/bambam/BamHeaderReadGroupInterface.hpp
/usr/include/libmaus2/bambam/BamHeaderUpdate.hpp
/usr/include/libmaus2/bambam/BamIndex.hpp
/usr/include/libmaus2/bambam/BamIndexBin.hpp
/usr/include/libmaus2/bambam/BamIndexBinChunk.hpp
/usr/include/libmaus2/bambam/BamIndexGenerator.hpp
/usr/include/libmaus2/bambam/BamIndexLinear.hpp
/usr/include/libmaus2/bambam/BamIndexLinearChunk.hpp
/usr/include/libmaus2/bambam/BamIndexMetaInfo.hpp
/usr/include/libmaus2/bambam/BamIndexRef.hpp
/usr/include/libmaus2/bambam/BamMergeCoordinate.hpp
/usr/include/libmaus2/bambam/BamMergeQueryName.hpp
/usr/include/libmaus2/bambam/BamMergeTemplate.hpp
/usr/include/libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp
/usr/include/libmaus2/bambam/BamNumExtractor.hpp
/usr/include/libmaus2/bambam/BamNumericalIndexBase.hpp
/usr/include/libmaus2/bambam/BamNumericalIndexDecoder.hpp
/usr/include/libmaus2/bambam/BamNumericalIndexGenerator.hpp
/usr/include/libmaus2/bambam/BamParallelRewrite.hpp
/usr/include/libmaus2/bambam/BamPeeker.hpp
/usr/include/libmaus2/bambam/BamRange.hpp
/usr/include/libmaus2/bambam/BamRangeDecoder.hpp
/usr/include/libmaus2/bambam/BamRangeParser.hpp
/usr/include/libmaus2/bambam/BamRawDecoder.hpp
/usr/include/libmaus2/bambam/BamRawPeeker.hpp
/usr/include/libmaus2/bambam/BamSeqEncodeTable.hpp
/usr/include/libmaus2/bambam/BamStreamingMarkDuplicates.hpp
/usr/include/libmaus2/bambam/BamStreamingMarkDuplicatesSupport.hpp
/usr/include/libmaus2/bambam/BamToFastqOutputFileSet.hpp
/usr/include/libmaus2/bambam/BamWriter.hpp
/usr/include/libmaus2/bambam/BgzfDeflateOutputCallbackBamIndex.hpp
/usr/include/libmaus2/bambam/BgzfDeflateOutputCallbackBamNumericalIndex.hpp
/usr/include/libmaus2/bambam/ChecksumsFactory.hpp
/usr/include/libmaus2/bambam/ChecksumsInterface.hpp
/usr/include/libmaus2/bambam/ChecksumsInterfaceAllocator.hpp
/usr/include/libmaus2/bambam/ChecksumsInterfaceTypeInfo.hpp
/usr/include/libmaus2/bambam/Chromosome.hpp
/usr/include/libmaus2/bambam/ChromosomeVectorMerge.hpp
/usr/include/libmaus2/bambam/CigarDecoder.hpp
/usr/include/libmaus2/bambam/CigarOperation.hpp
/usr/include/libmaus2/bambam/CigarRunLengthDecoder.hpp
/usr/include/libmaus2/bambam/CigarStringParser.hpp
/usr/include/libmaus2/bambam/CigarStringReader.hpp
/usr/include/libmaus2/bambam/CircularHashCollatingBamDecoder.hpp
/usr/include/libmaus2/bambam/CollatingBamDecoderAlignmentInputCallback.hpp
/usr/include/libmaus2/bambam/CompactReadEndsBase.hpp
/usr/include/libmaus2/bambam/CompactReadEndsComparator.hpp
/usr/include/libmaus2/bambam/CramRange.hpp
/usr/include/libmaus2/bambam/DecoderBase.hpp
/usr/include/libmaus2/bambam/DupMarkBase.hpp
/usr/include/libmaus2/bambam/DupSetCallback.hpp
/usr/include/libmaus2/bambam/DupSetCallbackSet.hpp
/usr/include/libmaus2/bambam/DupSetCallbackSharedVector.hpp
/usr/include/libmaus2/bambam/DupSetCallbackStream.hpp
/usr/include/libmaus2/bambam/DupSetCallbackVector.hpp
/usr/include/libmaus2/bambam/DuplicationMetrics.hpp
/usr/include/libmaus2/bambam/EncoderBase.hpp
/usr/include/libmaus2/bambam/GeneFlatFile.hpp
/usr/include/libmaus2/bambam/GeneFlatFileEntry.hpp
/usr/include/libmaus2/bambam/HeaderLine.hpp
/usr/include/libmaus2/bambam/MdNmRecalculation.hpp
/usr/include/libmaus2/bambam/MdStringComputationContext.hpp
/usr/include/libmaus2/bambam/MergeQueueElement.hpp
/usr/include/libmaus2/bambam/OptName.hpp
/usr/include/libmaus2/bambam/OptNameReader.hpp
/usr/include/libmaus2/bambam/OpticalComparator.hpp
/usr/include/libmaus2/bambam/PileQualityVectorElement.hpp
/usr/include/libmaus2/bambam/PileVectorElement.hpp
/usr/include/libmaus2/bambam/ProgramHeaderLineSet.hpp
/usr/include/libmaus2/bambam/ReadEnds.hpp
/usr/include/libmaus2/bambam/ReadEndsBase.hpp
/usr/include/libmaus2/bambam/ReadEndsBaseLongHashAttributeComparator.hpp
/usr/include/libmaus2/bambam/ReadEndsBasePointerComparator.hpp
/usr/include/libmaus2/bambam/ReadEndsBaseShortHashAttributeComparator.hpp
/usr/include/libmaus2/bambam/ReadEndsBlockDecoderBase.hpp
/usr/include/libmaus2/bambam/ReadEndsBlockDecoderBaseCollection.hpp
/usr/include/libmaus2/bambam/ReadEndsBlockDecoderBaseCollectionInfo.hpp
/usr/include/libmaus2/bambam/ReadEndsBlockDecoderBaseCollectionInfoBase.hpp
/usr/include/libmaus2/bambam/ReadEndsBlockIndexSet.hpp
/usr/include/libmaus2/bambam/ReadEndsContainer.hpp
/usr/include/libmaus2/bambam/ReadEndsContainerBase.hpp
/usr/include/libmaus2/bambam/ReadEndsFreeList.hpp
/usr/include/libmaus2/bambam/ReadEndsHeapPairComparator.hpp
/usr/include/libmaus2/bambam/ReadEndsListNode.hpp
/usr/include/libmaus2/bambam/ReadEndsStreamDecoder.hpp
/usr/include/libmaus2/bambam/ReadEndsStreamDecoderBase.hpp
/usr/include/libmaus2/bambam/ReadEndsStreamDecoderFileBase.hpp
/usr/include/libmaus2/bambam/ReadGroup.hpp
/usr/include/libmaus2/bambam/RgInfo.hpp
/usr/include/libmaus2/bambam/SamDecoder.hpp
/usr/include/libmaus2/bambam/SamDecoderWrapper.hpp
/usr/include/libmaus2/bambam/SamEncoder.hpp
/usr/include/libmaus2/bambam/SamInfo.hpp
/usr/include/libmaus2/bambam/SamInfoAllocator.hpp
/usr/include/libmaus2/bambam/SamInfoBase.hpp
/usr/include/libmaus2/bambam/SamInfoTypeInfo.hpp
/usr/include/libmaus2/bambam/SamPrintableTable.hpp
/usr/include/libmaus2/bambam/SamZPrintableTable.hpp
/usr/include/libmaus2/bambam/Scram.h
/usr/include/libmaus2/bambam/ScramDecoder.hpp
/usr/include/libmaus2/bambam/ScramEncoder.hpp
/usr/include/libmaus2/bambam/ScramInputContainer.hpp
/usr/include/libmaus2/bambam/SeqChksumPrimeNumbers.hpp
/usr/include/libmaus2/bambam/SeqChksumUpdateContext.hpp
/usr/include/libmaus2/bambam/SnappyAlignmentMergeInput.hpp
/usr/include/libmaus2/bambam/SortedFragDecoder.hpp
/usr/include/libmaus2/bambam/StrCmpNum.hpp
/usr/include/libmaus2/bambam/StrCmpNumRecode.hpp
/usr/include/libmaus2/bambam/parallel/AddDuplicationMetricsInterface.hpp
/usr/include/libmaus2/bambam/parallel/AddPendingCompressBufferWriteInterface.hpp
/usr/include/libmaus2/bambam/parallel/AddWritePendingBgzfBlockInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBlockCompressPackage.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBlockCompressPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBuffer.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBufferAllocator.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBufferHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBufferReinsertInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBufferReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentBufferTypeInfo.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewriteBuffer.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewriteBufferAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewriteBufferAllocator.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewriteBufferCoordinateComparator.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewriteBufferPosComparator.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewriteBufferReinsertForFillingInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewritePosMergeSortPackage.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewritePosSortBaseSortPackage.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewritePosSortContext.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewritePosSortContextBaseBlockSortedInterface.hpp
/usr/include/libmaus2/bambam/parallel/AlignmentRewritePosSortContextMergePackageFinished.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockIndexingBlockFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockIndexingWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockIndexingWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockIndexingWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockNumericalIndexingBlockFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockNumericalIndexingWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockNumericalIndexingWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/BamBlockNumericalIndexingWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/BaseMergeSortWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/BaseSortWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/BaseSortWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/BgzfInflateZStreamBaseGetInterface.hpp
/usr/include/libmaus2/bambam/parallel/BgzfInflateZStreamBaseReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/BgzfLinearMemCompressWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/BgzfLinearMemCompressWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/BgzfLinearMemCompressWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/BgzfOutputBlockWrittenInterface.hpp
/usr/include/libmaus2/bambam/parallel/BlockCompressPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/BlockMergeControl.hpp
/usr/include/libmaus2/bambam/parallel/BlockMergeControlTypeBase.hpp
/usr/include/libmaus2/bambam/parallel/BlockSortControl.hpp
/usr/include/libmaus2/bambam/parallel/BlockSortControlBase.hpp
/usr/include/libmaus2/bambam/parallel/ChecksumsInterfaceGetInterface.hpp
/usr/include/libmaus2/bambam/parallel/ChecksumsInterfacePutInterface.hpp
/usr/include/libmaus2/bambam/parallel/CompressBuffer.hpp
/usr/include/libmaus2/bambam/parallel/CompressBufferAllocator.hpp
/usr/include/libmaus2/bambam/parallel/CompressBufferHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/CompressionPendingElement.hpp
/usr/include/libmaus2/bambam/parallel/ControlInputInfo.hpp
/usr/include/libmaus2/bambam/parallel/CramEncodingSupportData.hpp
/usr/include/libmaus2/bambam/parallel/CramEncodingWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/CramEncodingWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/CramEncodingWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/CramInterface.h
/usr/include/libmaus2/bambam/parallel/CramOutputBlock.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockChecksumComputedInterface.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockChecksumPackage.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockChecksumPackageDispatcher.hpp
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/usr/include/libmaus2/bambam/parallel/CramOutputBlockIdComparator.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockSizeComparator.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockWritePackage.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockWritePackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockWritePackageFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/CramOutputBlockWritePackageReturnInterface.hpp
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/usr/include/libmaus2/bambam/parallel/DecompressBlockWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/DecompressBlocksWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/DecompressBlocksWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/DecompressBlocksWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlock.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlockAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlockAllocator.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlockHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlockReorderHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlockReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedBlockTypeInfo.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedPendingObject.hpp
/usr/include/libmaus2/bambam/parallel/DecompressedPendingObjectHeapComparator.hpp
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/usr/include/libmaus2/bambam/parallel/FastQInputDescBase.hpp
/usr/include/libmaus2/bambam/parallel/FastqInputPackage.hpp
/usr/include/libmaus2/bambam/parallel/FastqInputPackageAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/FastqInputPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/FastqInputPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/FastqParsePackage.hpp
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/usr/include/libmaus2/bambam/parallel/FastqParsePackageFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/FastqParsePackageReturnInterface.hpp
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/usr/include/libmaus2/bambam/parallel/FastqToBamControlInputBlockHeapComparator.hpp
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/usr/include/libmaus2/bambam/parallel/FileChecksumBlockWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragReadEndsContainerFlushFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragReadEndsContainerFlushWorkPackage.hpp
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/usr/include/libmaus2/bambam/parallel/FragReadEndsContainerFlushWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragReadEndsMergeWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/FragReadEndsMergeWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/FragReadEndsMergeWorkPackageFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragReadEndsMergeWorkPackageReturnInterface.hpp
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/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferBaseSortWorkPackageReturnInterface.hpp
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/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferMergeSortWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferMergeSortWorkPackageReturnInterface.hpp
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/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferPointerTypeSwitchHelper.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferPosComparator.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferQueryNameComparator.hpp
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/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferReorderWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferReorderWorkPackageFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferReorderWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteFragmentCompleteInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteReadEndsWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteReadEndsWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteReadEndsWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferSortContext.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferSortContextBaseBlockSortedInterface.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferSortContextMergePackageFinished.hpp
/usr/include/libmaus2/bambam/parallel/FragmentAlignmentBufferSortFinishedInterface.hpp
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/usr/include/libmaus2/bambam/parallel/GenericInputBamParseWorkPackageBlockParsedInterface.hpp
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/usr/include/libmaus2/bambam/parallel/GenericInputBamParseWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBase.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBgzfDecompressionWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBgzfDecompressionWorkPackageDecompressedBlockReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBgzfDecompressionWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBgzfDecompressionWorkPackageMemInputBlockReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBgzfDecompressionWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBgzfDecompressionWorkSubBlockDecompressionFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBlock.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBlockAllocator.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBlockFillResult.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBlockSubBlockInfo.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputBlockTypeInfo.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockCompressionFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockCompressionWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockCompressionWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockCompressionWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockWritePackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockWritePackageBlockWrittenInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockWritePackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlockWritePackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlocksWritePackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlocksWritePackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlBlocksWritePackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlCompressionPending.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlCompressionPendingHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlGetCompressorInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlMergeBlockFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlMergeHeapEntry.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlMergeRequeue.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlPutCompressorInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReadAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReadWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReadWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReadWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReorderWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReorderWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReorderWorkPackageFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlReorderWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlSetMergeStallSlotInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlStreamInfo.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlSubBlockPending.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputControlSubBlockPendingHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputMergeDecompressedBlockReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputMergeWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputMergeWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputMergeWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputMergeWorkRequest.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputSingleData.hpp
/usr/include/libmaus2/bambam/parallel/GenericInputSingleDataBamParseInfo.hpp
/usr/include/libmaus2/bambam/parallel/GetBgzfDeflateZStreamBaseInterface.hpp
/usr/include/libmaus2/bambam/parallel/InputBlock.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockAllocator.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockTypeInfo.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/InputBlockWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/MemInputBlock.hpp
/usr/include/libmaus2/bambam/parallel/MergeSortWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsContainerFlushFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsContainerFlushWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsContainerFlushWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsContainerFlushWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsMergeWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsMergeWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsMergeWorkPackageFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/PairReadEndsMergeWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/ParseBlockWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/ParseBlockWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/ParseInfo.hpp
/usr/include/libmaus2/bambam/parallel/ParseInfoHeaderCompleteCallback.hpp
/usr/include/libmaus2/bambam/parallel/ParsePackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/ParsedBlockAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/ParsedBlockStallInterface.hpp
/usr/include/libmaus2/bambam/parallel/PushBackSpace.hpp
/usr/include/libmaus2/bambam/parallel/PutBgzfDeflateZStreamBaseInterface.hpp
/usr/include/libmaus2/bambam/parallel/ReadEndsContainerAllocator.hpp
/usr/include/libmaus2/bambam/parallel/ReadEndsContainerFreeListInterface.hpp
/usr/include/libmaus2/bambam/parallel/ReadEndsContainerTypeInfo.hpp
/usr/include/libmaus2/bambam/parallel/ReadEndsMergeRequest.hpp
/usr/include/libmaus2/bambam/parallel/RefIdInterval.hpp
/usr/include/libmaus2/bambam/parallel/RequeReadInterface.hpp
/usr/include/libmaus2/bambam/parallel/ReturnBgzfOutputBufferInterface.hpp
/usr/include/libmaus2/bambam/parallel/ReturnCompressionPendingElementInterface.hpp
/usr/include/libmaus2/bambam/parallel/ReturnRewriteBufferInterface.hpp
/usr/include/libmaus2/bambam/parallel/RewriteBlockWorkPackage.hpp
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/usr/include/libmaus2/bambam/parallel/RewritePackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/SamEncoderObject.hpp
/usr/include/libmaus2/bambam/parallel/SamEncodingWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/SamEncodingWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/SamEncodingWorkPackageWrapper.hpp
/usr/include/libmaus2/bambam/parallel/SamEncodingWorkPackageWrapperReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/SamParseDecompressedBlockFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/SamParseFragmentParsedInterface.hpp
/usr/include/libmaus2/bambam/parallel/SamParseGetSamInfoInterface.hpp
/usr/include/libmaus2/bambam/parallel/SamParsePending.hpp
/usr/include/libmaus2/bambam/parallel/SamParsePendingHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/SamParsePutSamInfoInterface.hpp
/usr/include/libmaus2/bambam/parallel/SamParseWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/SamParseWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/SamParseWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/ScramCramEncoding.hpp
/usr/include/libmaus2/bambam/parallel/SmallLinearBlockCompressionPendingObject.hpp
/usr/include/libmaus2/bambam/parallel/SmallLinearBlockCompressionPendingObjectFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/SmallLinearBlockCompressionPendingObjectHeapComparator.hpp
/usr/include/libmaus2/bambam/parallel/SortControl.hpp
/usr/include/libmaus2/bambam/parallel/SortFinishedInterface.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockFragmentAddPendingInterface.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockFragmentPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockFragmentWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockFragmentWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/ValidateBlockWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/ValidatePackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/ValidationFragment.hpp
/usr/include/libmaus2/bambam/parallel/WriteBlockWorkPackage.hpp
/usr/include/libmaus2/bambam/parallel/WriteBlockWorkPackageDispatcher.hpp
/usr/include/libmaus2/bambam/parallel/WriteBlockWorkPackageReturnInterface.hpp
/usr/include/libmaus2/bambam/parallel/WritePendingObject.hpp
/usr/include/libmaus2/bambam/parallel/WritePendingObjectHeapComparator.hpp
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/usr/include/libmaus2/bitio/ArrayDecode.hpp
/usr/include/libmaus2/bitio/BitIO.hpp
/usr/include/libmaus2/bitio/BitIOInput.hpp
/usr/include/libmaus2/bitio/BitIOOutput.hpp
/usr/include/libmaus2/bitio/BitSet.hpp
/usr/include/libmaus2/bitio/BitStreamFileDecoder.hpp
/usr/include/libmaus2/bitio/BitVector.hpp
/usr/include/libmaus2/bitio/BitVectorConcat.hpp
/usr/include/libmaus2/bitio/BitVectorInput.hpp
/usr/include/libmaus2/bitio/BitVectorOutput.hpp
/usr/include/libmaus2/bitio/BitWriter.hpp
/usr/include/libmaus2/bitio/BufferIterator.hpp
/usr/include/libmaus2/bitio/CheckedBitWriter.hpp
/usr/include/libmaus2/bitio/Clz.hpp
/usr/include/libmaus2/bitio/CompactArray.hpp
/usr/include/libmaus2/bitio/CompactArrayBase.hpp
/usr/include/libmaus2/bitio/CompactArrayWriter.hpp
/usr/include/libmaus2/bitio/CompactArrayWriterFile.hpp
/usr/include/libmaus2/bitio/CompactDecoderBuffer.hpp
/usr/include/libmaus2/bitio/CompactOffsetArray.hpp
/usr/include/libmaus2/bitio/CompactOffsetOneArray.hpp
/usr/include/libmaus2/bitio/CompactQueue.hpp
/usr/include/libmaus2/bitio/CompactSparseArray.hpp
/usr/include/libmaus2/bitio/Ctz.hpp
/usr/include/libmaus2/bitio/FastWriteBitWriter.hpp
/usr/include/libmaus2/bitio/MarkerFastWriteBitWriter.hpp
/usr/include/libmaus2/bitio/OutputBuffer.hpp
/usr/include/libmaus2/bitio/PacDecoderBuffer.hpp
/usr/include/libmaus2/bitio/ReverseTable.hpp
/usr/include/libmaus2/bitio/SignedCompactArray.hpp
/usr/include/libmaus2/bitio/SwapWordBitBlock.hpp
/usr/include/libmaus2/bitio/getBit.hpp
/usr/include/libmaus2/bitio/getBits.hpp
/usr/include/libmaus2/bitio/putBit.hpp
/usr/include/libmaus2/bitio/putBits.hpp
/usr/include/libmaus2/bitio/readElias.hpp
/usr/include/libmaus2/bitio/swapBitBlocksByReversal.hpp
/usr/include/libmaus2/btree/btree.hpp
/usr/include/libmaus2/clustering/HashCreation.hpp
/usr/include/libmaus2/clustering/HashCreationBase.hpp
/usr/include/libmaus2/clustering/KMeans.hpp
/usr/include/libmaus2/clustering/KmerBase.hpp
/usr/include/libmaus2/clustering/ProduceEdgeRequest.hpp
/usr/include/libmaus2/cumfreq/DynamicCumulativeFrequencies.hpp
/usr/include/libmaus2/cumfreq/SlowCumFreq.hpp
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/usr/include/libmaus2/dazzler/align/AlignmentFileCat.hpp
/usr/include/libmaus2/dazzler/align/AlignmentFileConstants.hpp
/usr/include/libmaus2/dazzler/align/AlignmentFileDecoder.hpp
/usr/include/libmaus2/dazzler/align/AlignmentFileRegion.hpp
/usr/include/libmaus2/dazzler/align/AlignmentFileSymmetryCheck.hpp
/usr/include/libmaus2/dazzler/align/AlignmentSplitWriter.hpp
/usr/include/libmaus2/dazzler/align/AlignmentWriter.hpp
/usr/include/libmaus2/dazzler/align/AlignmentWriterArray.hpp
/usr/include/libmaus2/dazzler/align/ApproximateRun.hpp
/usr/include/libmaus2/dazzler/align/ApproximateRunPartContainer.hpp
/usr/include/libmaus2/dazzler/align/BinIndexDecoder.hpp
/usr/include/libmaus2/dazzler/align/CompactRunPartContainer.hpp
/usr/include/libmaus2/dazzler/align/DalignerIndexDecoder.hpp
/usr/include/libmaus2/dazzler/align/FilterUnique.hpp
/usr/include/libmaus2/dazzler/align/GetTransitiveStrict.hpp
/usr/include/libmaus2/dazzler/align/GraphCheck.hpp
/usr/include/libmaus2/dazzler/align/GraphDecoder.hpp
/usr/include/libmaus2/dazzler/align/GraphDecoderContext.hpp
/usr/include/libmaus2/dazzler/align/GraphDecoderContextAllocator.hpp
/usr/include/libmaus2/dazzler/align/GraphDecoderContextTypeInfo.hpp
/usr/include/libmaus2/dazzler/align/GraphEncoder.hpp
/usr/include/libmaus2/dazzler/align/LASToBamConverterBase.hpp
/usr/include/libmaus2/dazzler/align/LasFileRange.hpp
/usr/include/libmaus2/dazzler/align/LasIntervals.hpp
/usr/include/libmaus2/dazzler/align/LasMerge2.hpp
/usr/include/libmaus2/dazzler/align/LasRangeDecoder.hpp
/usr/include/libmaus2/dazzler/align/LasSort2.hpp
/usr/include/libmaus2/dazzler/align/LasSort2Cascade.hpp
/usr/include/libmaus2/dazzler/align/Overlap.hpp
/usr/include/libmaus2/dazzler/align/OverlapAdapter.hpp
/usr/include/libmaus2/dazzler/align/OverlapData.hpp
/usr/include/libmaus2/dazzler/align/OverlapDataInterface.hpp
/usr/include/libmaus2/dazzler/align/OverlapHeader.hpp
/usr/include/libmaus2/dazzler/align/OverlapHeapComparator.hpp
/usr/include/libmaus2/dazzler/align/OverlapIndexer.hpp
/usr/include/libmaus2/dazzler/align/OverlapIndexerBase.hpp
/usr/include/libmaus2/dazzler/align/OverlapInfo.hpp
/usr/include/libmaus2/dazzler/align/OverlapInfoIndexer.hpp
/usr/include/libmaus2/dazzler/align/OverlapMeta.hpp
/usr/include/libmaus2/dazzler/align/OverlapMetaIteratorGet.hpp
/usr/include/libmaus2/dazzler/align/OverlapParser.hpp
/usr/include/libmaus2/dazzler/align/OverlapProperCheck.hpp
/usr/include/libmaus2/dazzler/align/Path.hpp
/usr/include/libmaus2/dazzler/align/ReadIntervals.hpp
/usr/include/libmaus2/dazzler/align/ReadIntervalsVector.hpp
/usr/include/libmaus2/dazzler/align/RefMapEntry.hpp
/usr/include/libmaus2/dazzler/align/RefMapEntryVector.hpp
/usr/include/libmaus2/dazzler/align/SimpleOverlapParser.hpp
/usr/include/libmaus2/dazzler/align/SimpleOverlapVectorParser.hpp
/usr/include/libmaus2/dazzler/align/SortOrderCheck.hpp
/usr/include/libmaus2/dazzler/align/SortingOverlapBlockInput.hpp
/usr/include/libmaus2/dazzler/align/SortingOverlapOutputBuffer.hpp
/usr/include/libmaus2/dazzler/align/SortingOverlapOutputBufferMerger.hpp
/usr/include/libmaus2/dazzler/align/SubIntervalResult.hpp
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/usr/include/libmaus2/lcs/NPLLinMem.hpp
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