Package - libchado-perl
Primary informations
Download package: http://deb.debian.org/debian/pool/main/libc/libchado-perl/libchado-perl_1.31-6_all.deb (Size: 2.2MiB)| Property | Value |
|---|---|
| Package | libchado-perl |
| Version | 1.31-6 |
| Installed-Size | 80965 |
| Maintainer | Debian Med Packaging Team |
| Architecture | all |
| Depends | perl, postgresql-client, libbio-chado-schema-perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl, make |
| Recommends | xsltproc, chado-utils |
| Description | database schema and tools for genomic data |
| Description-md5 | ac7a6c0289cbd3f992fc578a3bf299a7 |
| Homepage | http://gmod.org/wiki/Chado |
| Tag | devel::lang:perl, devel::library, implemented-in::perl |
| Section | perl |
| Priority | optional |
| Filename | pool/main/libc/libchado-perl/libchado-perl_1.31-6_all.deb |
| Size | 2281288 |
| MD5sum | e382181234143737d0e273beb5f45974 |
| SHA256 | f9a9a16f8cd9b6c3ec02c7993db3376b287da27328f236858a697e5cbb86903d |
Files in package
- /etc/gmod/gmod-chado.conf
- /etc/gmod/gmod.conf
- /usr/share/doc/libchado-perl/README.Apollo
- /usr/share/doc/libchado-perl/README.Debian
- /usr/share/doc/libchado-perl/README.gz
- /usr/share/doc/libchado-perl/changelog.Debian.gz
- /usr/share/doc/libchado-perl/changelog.gz
- /usr/share/doc/libchado-perl/copyright
- /usr/share/doc/libchado-perl/examples/chado-xml/README
- /usr/share/doc/libchado-perl/examples/chado-xml/examples/CG10833.expanded.chado-xml.gz
- /usr/share/doc/libchado-perl/examples/chado-xml/examples/CG10833.with-macros.chado-xml.gz
- /usr/share/doc/libchado-perl/examples/chado-xml/examples/CG10833.with-macros.defaults-stripped.chado-xml.gz
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/README
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/chado-create-feature-nesting.xsl
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/chado-expand-macros.xsl
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/chado-insert-macros.xsl.gz
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/chado-remove-analysis-features.xsl
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/chado-remove-default-elements.xsl
- /usr/share/doc/libchado-perl/examples/chado-xml/xsl/chado-remove-feature-nesting.xsl
- /usr/share/doc/libchado-perl/examples/doc/COPYRIGHT
- /usr/share/doc/libchado-perl/examples/doc/about-gff2biomart.pod
- /usr/share/doc/libchado-perl/examples/doc/css/chado.css
- /usr/share/doc/libchado-perl/examples/doc/examples/dicistronic-gene-example.chado.gz
- /usr/share/doc/libchado-perl/examples/doc/examples/dicistronic-gene-example.chaos.gz
- /usr/share/doc/libchado-perl/examples/doc/examples/dicistronic-gene-example.game.gz
- /usr/share/doc/libchado-perl/examples/doc/examples/dicistronic-gene-example.png
- /usr/share/doc/libchado-perl/examples/doc/examples/dmel_NPFR1.chado.gz
- /usr/share/doc/libchado-perl/examples/doc/examples/dmel_NPFR1.chaos.gz
- /usr/share/doc/libchado-perl/examples/doc/examples/dmel_NPFR1.game.gz
- /usr/share/doc/libchado-perl/examples/doc/examples/dmel_NPFR1.png
- /usr/share/doc/libchado-perl/examples/doc/gff2biomart-update.note
- /usr/share/doc/libchado-perl/examples/doc/gmod-tools-readme.pod.gz
- /usr/share/doc/libchado-perl/examples/doc/index.html
- /usr/share/doc/libchado-perl/examples/doc/wiki/generateChadoWikiTables.py.gz
- /usr/share/doc/libchado-perl/examples/doc/wiki/wiki.tmpl
- /usr/share/doc/libchado-perl/examples/doc/xsl/scenario-to-html-inline.xsl.gz
- /usr/share/doc/libchado-perl/examples/doc/xsl/scenario-to-html.xsl.gz
- /usr/share/doc/libchado-perl/examples/organism/examples/examples-orgs.chado-xml
- /usr/share/doc/libchado-perl/examples/organism/functions/organism-loading.plpgsql
- /usr/share/doc/libchado-perl/examples/organism/functions/organism.plpgsql
- /usr/share/doc/libchado-perl/examples/organism/functions/organism.sqlapi
- /usr/share/doc/libchado-perl/examples/organism/organism.html
- /usr/share/doc/libchado-perl/examples/organism/organism.sql.gz
- /usr/share/doc/libchado-perl/examples/phylogeny/Changes
- /usr/share/doc/libchado-perl/examples/phylogeny/examples/README
- /usr/share/doc/libchado-perl/examples/phylogeny/examples/org.chado-xml
- /usr/share/doc/libchado-perl/examples/phylogeny/examples/sample-phylo.chado-xml.gz
- /usr/share/doc/libchado-perl/examples/phylogeny/examples/sample-phylo.nhx
- /usr/share/doc/libchado-perl/examples/phylogeny/functions/phylo.plpgsql
- /usr/share/doc/libchado-perl/examples/phylogeny/functions/phylo.sqlapi
- /usr/share/doc/libchado-perl/examples/phylogeny/phylogeny.html
- /usr/share/doc/libchado-perl/examples/phylogeny/phylogeny.sql.gz
- /usr/share/gmod/chado/Makefile.PL
- /usr/share/gmod/chado/bin/AutoDBI.PL
- /usr/share/gmod/chado/bin/config.PLS
- /usr/share/gmod/chado/bin/gmod_chado_properties.pl
- /usr/share/gmod/chado/bin/test_load.pl
- /usr/share/gmod/chado/bin/test_load.sh
- /usr/share/gmod/chado/bin/testdb.pl
- /usr/share/gmod/chado/chado-module-metadata.xml
- /usr/share/gmod/chado/conf/gmod-chado.conf
- /usr/share/gmod/chado/conf/gmod.conf
- /usr/share/gmod/chado/load/Build.PL
- /usr/share/gmod/chado/load/bin/bulk_load_gff3.PLS
- /usr/share/gmod/chado/load/bin/gmod_bulk_load_gff3.pl
- /usr/share/gmod/chado/load/bin/load_gff3.PLS
- /usr/share/gmod/chado/load/etc/README
- /usr/share/gmod/chado/load/etc/chap.obo
- /usr/share/gmod/chado/load/etc/cv_property.obo
- /usr/share/gmod/chado/load/etc/extra.sql
- /usr/share/gmod/chado/load/etc/feature_property.obo
- /usr/share/gmod/chado/load/etc/genbank_feature_property.obo
- /usr/share/gmod/chado/load/etc/initialize.sql
- /usr/share/gmod/chado/load/etc/log.conf
- /usr/share/gmod/chado/load/logs
- /usr/share/gmod/chado/load/tt2/LoadDBI.tt2
- /usr/share/gmod/chado/load/tt2/load.conf.tt2
- /usr/share/gmod/chado/modules/audit/add-audits.tmpl
- /usr/share/gmod/chado/modules/audit/audit_tables.sql
- /usr/share/gmod/chado/modules/audit/make_audit_ddl
- /usr/share/gmod/chado/modules/bin/makedep.pl
- /usr/share/gmod/chado/modules/bin/mk.pl
- /usr/share/gmod/chado/modules/cell_line/cell_line.html
- /usr/share/gmod/chado/modules/cell_line/cell_line.sql
- /usr/share/gmod/chado/modules/companalysis/companalysis.html
- /usr/share/gmod/chado/modules/companalysis/companalysis.sql
- /usr/share/gmod/chado/modules/companalysis/functions/companalysis-loading.plpgsql
- /usr/share/gmod/chado/modules/companalysis/functions/companalysis-loading.sqlapi
- /usr/share/gmod/chado/modules/complete.sql
- /usr/share/gmod/chado/modules/contact/contact.html
- /usr/share/gmod/chado/modules/contact/contact.sql
- /usr/share/gmod/chado/modules/contact/contactprop.sql
- /usr/share/gmod/chado/modules/cv/bridges/bin/create-bridge-sql.pl
- /usr/share/gmod/chado/modules/cv/bridges/godb-bridge.plpgsql
- /usr/share/gmod/chado/modules/cv/bridges/godb-bridge.sql.xml
- /usr/share/gmod/chado/modules/cv/cv-dbapi.sqli
- /usr/share/gmod/chado/modules/cv/cv.html
- /usr/share/gmod/chado/modules/cv/cv.sql
- /usr/share/gmod/chado/modules/cv/functions/cv-helper.plpgsql
- /usr/share/gmod/chado/modules/cv/functions/cv-helper.sqlapi
- /usr/share/gmod/chado/modules/cv/functions/deductive_closure.plpgsql
- /usr/share/gmod/chado/modules/cv/functions/deductive_closure.sqlapi
- /usr/share/gmod/chado/modules/cv/functions/detect_cycle.plpgsql
- /usr/share/gmod/chado/modules/cv/functions/fill_cvtermpath.plpgsql
- /usr/share/gmod/chado/modules/cv/functions/get_subj_obj_ids.plpgsql
- /usr/share/gmod/chado/modules/cv/views/cv-convenience-views.sql
- /usr/share/gmod/chado/modules/cv/views/cv-logical-definitions-views.sql
- /usr/share/gmod/chado/modules/cv/views/cv-report.sql
- /usr/share/gmod/chado/modules/cv/views/cv-stats.sql
- /usr/share/gmod/chado/modules/cv/views/cv-views.sql
- /usr/share/gmod/chado/modules/db/db.html
- /usr/share/gmod/chado/modules/db/db.sql
- /usr/share/gmod/chado/modules/db/functions/db-loading.plpgsql
- /usr/share/gmod/chado/modules/db/functions/db-loading.sqlapi
- /usr/share/gmod/chado/modules/db/views/db-report.sql
- /usr/share/gmod/chado/modules/default_nofuncs.sql
- /usr/share/gmod/chado/modules/default_schema.sql
- /usr/share/gmod/chado/modules/expression/expression.html
- /usr/share/gmod/chado/modules/expression/expression.sql
- /usr/share/gmod/chado/modules/extension.modules
- /usr/share/gmod/chado/modules/function.modules
- /usr/share/gmod/chado/modules/general/general.html
- /usr/share/gmod/chado/modules/general/general.sql
- /usr/share/gmod/chado/modules/genetic/genetic.html
- /usr/share/gmod/chado/modules/genetic/genetic.sql
- /usr/share/gmod/chado/modules/idb-full.modules
- /usr/share/gmod/chado/modules/library/library.sql
- /usr/share/gmod/chado/modules/mage/mage.html
- /usr/share/gmod/chado/modules/mage/mage.sql
- /usr/share/gmod/chado/modules/mage/mage.views
- /usr/share/gmod/chado/modules/map/map.sql
- /usr/share/gmod/chado/modules/module-tables.json
- /usr/share/gmod/chado/modules/natural_diversity/natural_diversity.html
- /usr/share/gmod/chado/modules/natural_diversity/natural_diversity.sql
- /usr/share/gmod/chado/modules/nofuncs.html
- /usr/share/gmod/chado/modules/nofuncs.sql
- /usr/share/gmod/chado/modules/organism/examples/examples-orgs.chado-xml
- /usr/share/gmod/chado/modules/organism/functions/organism-loading.plpgsql
- /usr/share/gmod/chado/modules/organism/functions/organism.plpgsql
- /usr/share/gmod/chado/modules/organism/functions/organism.sqlapi
- /usr/share/gmod/chado/modules/organism/organism.html
- /usr/share/gmod/chado/modules/organism/organism.sql
- /usr/share/gmod/chado/modules/phenotype/phenotype.html
- /usr/share/gmod/chado/modules/phenotype/phenotype.sql
- /usr/share/gmod/chado/modules/phylogeny/Changes
- /usr/share/gmod/chado/modules/phylogeny/examples/README
- /usr/share/gmod/chado/modules/phylogeny/examples/org.chado-xml
- /usr/share/gmod/chado/modules/phylogeny/examples/sample-phylo.chado-xml
- /usr/share/gmod/chado/modules/phylogeny/examples/sample-phylo.nhx
- /usr/share/gmod/chado/modules/phylogeny/functions/phylo.plpgsql
- /usr/share/gmod/chado/modules/phylogeny/functions/phylo.sqlapi
- /usr/share/gmod/chado/modules/phylogeny/phylogeny.html
- /usr/share/gmod/chado/modules/phylogeny/phylogeny.sql
- /usr/share/gmod/chado/modules/project/project.html
- /usr/share/gmod/chado/modules/project/project.sql
- /usr/share/gmod/chado/modules/pub/pub.sql
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/ad_hoc_cv
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/apollo-triggers.plpgsql
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/apollo.inserts
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/cv_inserts.sql
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/insert_ad_doc_cv.pl
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/naming_rules.txt
- /usr/share/gmod/chado/modules/sequence/apollo-bridge/sample_db/README
- /usr/share/gmod/chado/modules/sequence/bdgp/README
- /usr/share/gmod/chado/modules/sequence/bdgp/bdgp-indexes.sql
- /usr/share/gmod/chado/modules/sequence/bdgp/bdgp-views.sql
- /usr/share/gmod/chado/modules/sequence/bdgp/bin/create-so-layer.pl
- /usr/share/gmod/chado/modules/sequence/bdgp/doc/chado-sequence-ontology-layer.sxi
- /usr/share/gmod/chado/modules/sequence/bdgp/populate-match-floc.sql
- /usr/share/gmod/chado/modules/sequence/bdgp/so-views.sql
- /usr/share/gmod/chado/modules/sequence/bridges/bin/create-sofa-bridge.pl
- /usr/share/gmod/chado/modules/sequence/bridges/chaos-bridge.sql.xml
- /usr/share/gmod/chado/modules/sequence/bridges/gadfly-bridge.sql.xml
- /usr/share/gmod/chado/modules/sequence/bridges/so-bridge.sql
- /usr/share/gmod/chado/modules/sequence/bridges/so_bridge.sql
- /usr/share/gmod/chado/modules/sequence/bridges/sofa-bridge.sql
- /usr/share/gmod/chado/modules/sequence/functions/create_soi.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/delete-trigger.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/feature.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/feature.sqlapi
- /usr/share/gmod/chado/modules/sequence/functions/feature_ids_fx.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/feature_subalignments.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/frange.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/locgraph.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/locgraph.sqlapi
- /usr/share/gmod/chado/modules/sequence/functions/range.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/range.sqlapi
- /usr/share/gmod/chado/modules/sequence/functions/sequence-cv-helper.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/sequence-cv-helper.sqlapi
- /usr/share/gmod/chado/modules/sequence/functions/sequence-loading.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/sequence-loading.sqlapi
- /usr/share/gmod/chado/modules/sequence/functions/sequtil.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/sequtil.sqlapi
- /usr/share/gmod/chado/modules/sequence/functions/subsequence.plpgsql
- /usr/share/gmod/chado/modules/sequence/functions/subsequence.sqlapi
- /usr/share/gmod/chado/modules/sequence/gencode/gencode.sql
- /usr/share/gmod/chado/modules/sequence/gencode/gencode_data.sql
- /usr/share/gmod/chado/modules/sequence/gff-bridge/sequence-gff-funcs.plpgsql
- /usr/share/gmod/chado/modules/sequence/gff-bridge/sequence-gff-views.sql
- /usr/share/gmod/chado/modules/sequence/sequence-dbapi.sqli
- /usr/share/gmod/chado/modules/sequence/sequence.html
- /usr/share/gmod/chado/modules/sequence/sequence.pgfunc
- /usr/share/gmod/chado/modules/sequence/sequence.sql
- /usr/share/gmod/chado/modules/sequence/sequence_opt.xml
- /usr/share/gmod/chado/modules/sequence/sequence_views.sql
- /usr/share/gmod/chado/modules/sequence/views/exon-views.sql
- /usr/share/gmod/chado/modules/sequence/views/implicit-feature-views.sql
- /usr/share/gmod/chado/modules/sequence/views/range-views.sql
- /usr/share/gmod/chado/modules/sequence/views/sequence-cv-views.sql
- /usr/share/gmod/chado/modules/sequence/views/sequence-report.sql
- /usr/share/gmod/chado/modules/stock/stock.html
- /usr/share/gmod/chado/modules/stock/stock.sql
- /usr/share/gmod/chado/schemas/1-1.1/diff
- /usr/share/gmod/chado/schemas/1-1.1/diff.sql
- /usr/share/gmod/chado/schemas/1-1.11/diff
- /usr/share/gmod/chado/schemas/1-1.11/diff.sql
- /usr/share/gmod/chado/schemas/1-1.2/diff.sql
- /usr/share/gmod/chado/schemas/1-1.21/diff.sql
- /usr/share/gmod/chado/schemas/1-1.22/diff.sql
- /usr/share/gmod/chado/schemas/1-1.23/diff.sql
- /usr/share/gmod/chado/schemas/1-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.1-1.2/diff
- /usr/share/gmod/chado/schemas/1.1-1.2/diff.sql
- /usr/share/gmod/chado/schemas/1.1-1.21/diff
- /usr/share/gmod/chado/schemas/1.1-1.21/diff.sql
- /usr/share/gmod/chado/schemas/1.1-1.22/diff.sql
- /usr/share/gmod/chado/schemas/1.1-1.23/diff.sql
- /usr/share/gmod/chado/schemas/1.1-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.1/default_schema.sql
- /usr/share/gmod/chado/schemas/1.11-1.2/diff
- /usr/share/gmod/chado/schemas/1.11-1.2/diff.sql
- /usr/share/gmod/chado/schemas/1.11-1.21/diff
- /usr/share/gmod/chado/schemas/1.11-1.21/diff.sql
- /usr/share/gmod/chado/schemas/1.11-1.22/diff.sql
- /usr/share/gmod/chado/schemas/1.11-1.23/diff.sql
- /usr/share/gmod/chado/schemas/1.11-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.11/default_schema.sql
- /usr/share/gmod/chado/schemas/1.2-1.21/diff.sql
- /usr/share/gmod/chado/schemas/1.2-1.22/diff.sql
- /usr/share/gmod/chado/schemas/1.2-1.23/diff.sql
- /usr/share/gmod/chado/schemas/1.2-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.2/default_schema.sql
- /usr/share/gmod/chado/schemas/1.21-1.22/diff.sql
- /usr/share/gmod/chado/schemas/1.21-1.23/diff.sql
- /usr/share/gmod/chado/schemas/1.21-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.21/default_schema.sql
- /usr/share/gmod/chado/schemas/1.22-1.23/diff.sql
- /usr/share/gmod/chado/schemas/1.22-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.22/default_schema.sql
- /usr/share/gmod/chado/schemas/1.23-1.31/diff.sql
- /usr/share/gmod/chado/schemas/1.23/default_schema.sql
- /usr/share/gmod/chado/schemas/1.31/cv.diff.sql
- /usr/share/gmod/chado/schemas/1.31/default_schema.sql
- /usr/share/gmod/chado/schemas/1/default_schema.sql
- /usr/share/gmod/chado/schemas/generate_diff_dirs.pl
- /usr/share/gmod/chado/soi/README
- /usr/share/gmod/chado/soi/SOI/Adapter.pm
- /usr/share/gmod/chado/soi/SOI/Feature.pm
- /usr/share/gmod/chado/soi/SOI/FeatureDecor.pm
- /usr/share/gmod/chado/soi/SOI/GAMEHandler.pm
- /usr/share/gmod/chado/soi/SOI/GFF3Parser.pm
- /usr/share/gmod/chado/soi/SOI/IntersectGraph.pm
- /usr/share/gmod/chado/soi/SOI/Outputter.pm
- /usr/share/gmod/chado/soi/SOI/SOIHandler.pm
- /usr/share/gmod/chado/soi/SOI/Visitor.pm
- /usr/share/gmod/chado/soi/cgi/get_xml.pl
- /usr/share/gmod/chado/soi/scripts/dump_fasta.pl
- /usr/share/gmod/chado/soi/scripts/dump_segment.pl
- /usr/share/gmod/chado/soi/scripts/generegion.pl
- /usr/share/gmod/chado/soi/t/data/AE003790.cDNA.game.xml
- /usr/share/gmod/chado/soi/t/data/AE003790.soi.xml
- /usr/share/gmod/chado/soi/t/t_soi_parse_intersect
- /usr/share/gmod/chado/soi/templates/features_by_name.soi
- /usr/share/gmod/chado/soi/templates/genes_by_GO_term.soi
- /usr/share/gmod/chado/soi/templates/genes_by_child_count.soi
- /usr/share/gmod/chado/soi/templates/top_typed_feature.soi
- /usr/share/gmod/chado/soi/templates/top_typed_feature_no_soi.soi
- /usr/share/gmod/chado/soi/templates/typed_genes.soi
- /usr/share/gmod/chado/src/chado/modules/audit/add-audits.tmpl
- /usr/share/gmod/chado/src/chado/modules/audit/audit_tables.sql
- /usr/share/gmod/chado/src/chado/modules/audit/make_audit_ddl
- /usr/share/gmod/chado/src/chado/modules/bin/makedep.pl
- /usr/share/gmod/chado/src/chado/modules/bin/mk.pl
- /usr/share/gmod/chado/src/chado/modules/cell_line/cell_line.html
- /usr/share/gmod/chado/src/chado/modules/cell_line/cell_line.sql
- /usr/share/gmod/chado/src/chado/modules/companalysis/companalysis.html
- /usr/share/gmod/chado/src/chado/modules/companalysis/companalysis.sql
- /usr/share/gmod/chado/src/chado/modules/companalysis/functions/companalysis-loading.plpgsql
- /usr/share/gmod/chado/src/chado/modules/companalysis/functions/companalysis-loading.sqlapi
- /usr/share/gmod/chado/src/chado/modules/complete.sql
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