Package - kraken2

Package:  kraken2
apt-get install kraken2
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/k/kraken2/kraken2_2.1.3-1_amd64.deb (Size: 847.8KiB)

PropertyValue
Packagekraken2
Version2.1.3-1
Installed-Size1971
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.6), python3, ncbi-blast+
Descriptiontaxonomic classification system using exact k-mer matches
Description-md570f2ff9ad084534e552c6c2118d2a186
Homepagehttps://www.ccb.jhu.edu/software/kraken2/
Sectionscience
Priorityoptional
Filenamepool/main/k/kraken2/kraken2_2.1.3-1_amd64.deb
Size868196
MD5sumdc9df4488dae6523c2e94534ecf2a08e
SHA2566bf53c46f2adc3a8e24f66f43bb151444c35f2b3baa3c3365721b9133eb086d7

Files in package

  • /usr/bin/kraken2
  • /usr/bin/kraken2-build
  • /usr/bin/kraken2-inspect
  • /usr/lib/kraken2/16S_gg_installation.sh
  • /usr/lib/kraken2/16S_rdp_installation.sh
  • /usr/lib/kraken2/16S_silva_installation.sh
  • /usr/lib/kraken2/add_to_library.sh
  • /usr/lib/kraken2/build_db
  • /usr/lib/kraken2/build_gg_taxonomy.pl
  • /usr/lib/kraken2/build_kraken2_db.sh
  • /usr/lib/kraken2/build_rdp_taxonomy.pl
  • /usr/lib/kraken2/build_silva_taxonomy.pl
  • /usr/lib/kraken2/classify
  • /usr/lib/kraken2/clean_db.sh
  • /usr/lib/kraken2/cp_into_tempfile.pl
  • /usr/lib/kraken2/download_genomic_library.sh
  • /usr/lib/kraken2/download_taxonomy.sh
  • /usr/lib/kraken2/dump_table
  • /usr/lib/kraken2/estimate_capacity
  • /usr/lib/kraken2/k2
  • /usr/lib/kraken2/k2mask
  • /usr/lib/kraken2/kraken2
  • /usr/lib/kraken2/kraken2-build
  • /usr/lib/kraken2/kraken2-inspect
  • /usr/lib/kraken2/kraken2lib.pm
  • /usr/lib/kraken2/lookup_accession_numbers
  • /usr/lib/kraken2/lookup_accession_numbers.pl
  • /usr/lib/kraken2/make_seqid2taxid_map.pl
  • /usr/lib/kraken2/mask_low_complexity.sh
  • /usr/lib/kraken2/rsync_from_ncbi.pl
  • /usr/lib/kraken2/scan_fasta_file.pl
  • /usr/lib/kraken2/standard_installation.sh
  • /usr/share/doc-base/kraken2.kraken2
  • /usr/share/doc/kraken2/README.test
  • /usr/share/doc/kraken2/changelog.Debian.gz
  • /usr/share/doc/kraken2/changelog.gz
  • /usr/share/doc/kraken2/copyright
  • /usr/share/doc/kraken2/html/MANUAL.html
  • /usr/share/doc/kraken2/html/bar-bg.png
  • /usr/share/doc/kraken2/html/head.html
  • /usr/share/doc/kraken2/html/index.html
  • /usr/share/doc/kraken2/html/kraken.css
  • /usr/share/doc/kraken2/html/top.html
  • /usr/share/doc/kraken2/run-unit-test
  • /usr/share/doc/kraken2/test_data/Acartia_tonsa.fasta
  • /usr/share/doc/kraken2/test_data/Acinetobacter_phage.fasta.gz
  • /usr/share/doc/kraken2/test_data/test.fa
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/citation.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/delnodes.dmp.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/division.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/gc.prt.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/gencode.dmp.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/gi_taxid_nucl.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/merged.dmp.gz
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/names.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/nodes.dmp
  • /usr/share/doc/kraken2/test_data/test_db/taxonomy/readme.txt
  • /usr/share/man/man1/kraken2-build.1.gz
  • /usr/share/man/man1/kraken2-inspect.1.gz
  • /usr/share/man/man1/kraken2.1.gz