Package - igor
Primary informations
Download package: http://deb.debian.org/debian/pool/main/i/igor/igor_1.4.0+dfsg-5+b1_amd64.deb (Size: 580.6KiB)| Property | Value |
|---|---|
| Package | igor |
| Source | igor (1.4.0+dfsg-5) |
| Version | 1.4.0+dfsg-5+b1 |
| Installed-Size | 2761 |
| Maintainer | Debian Med Packaging Team |
| Architecture | amd64 |
| Depends | libblas3 | libblas.so.3, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libgsl28 (>= 2.8+dfsg), libjemalloc2 (>= 5.0.0), libstdc++6 (>= 14) |
| Description | infers V(D)J recombination processes from sequencing data |
| Description-md5 | 31969e1c198ef7d8d6b227efce73d8db |
| Homepage | https://github.com/qmarcou/IGoR/ |
| Section | science |
| Priority | optional |
| Filename | pool/main/i/igor/igor_1.4.0+dfsg-5+b1_amd64.deb |
| Size | 594568 |
| MD5sum | 6875c8696fead8362451add7d26f199b |
| SHA256 | fa55a8eab6ec4ed2dae26a4a9baea1575bf370623863e007366df02d102f2f73 |
Files in package
- /usr/bin/igor
- /usr/bin/igor-compute_pgen
- /usr/share/doc/igor/changelog.Debian.amd64.gz
- /usr/share/doc/igor/changelog.Debian.gz
- /usr/share/doc/igor/changelog.gz
- /usr/share/doc/igor/copyright
- /usr/share/doc/igor/examples/genomicDs.fasta
- /usr/share/doc/igor/examples/genomicJs_all_curated.fasta
- /usr/share/doc/igor/examples/genomicVs_with_primers.fasta
- /usr/share/doc/igor/examples/murugan_naive1_noncoding_demo_seqs.txt
- /usr/share/igor/demo/genomicDs.fasta
- /usr/share/igor/demo/genomicJs_all_curated.fasta
- /usr/share/igor/demo/genomicVs_with_primers.fasta
- /usr/share/igor/demo/murugan_naive1_noncoding_demo_seqs.txt
- /usr/share/igor/models/heavy_pen_substitution_matrix.csv
- /usr/share/igor/models/human/IGK/models/model_marginals.txt
- /usr/share/igor/models/human/IGK/models/model_parms.txt
- /usr/share/igor/models/human/IGK/ref_genome/J_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/IGK/ref_genome/V_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/IGK/ref_genome/genomicJs.fasta
- /usr/share/igor/models/human/IGK/ref_genome/genomicVs.fasta
- /usr/share/igor/models/human/IGL/models/model_marginals.txt
- /usr/share/igor/models/human/IGL/models/model_parms.txt
- /usr/share/igor/models/human/IGL/ref_genome/J_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/IGL/ref_genome/V_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/IGL/ref_genome/genomicJs.fasta
- /usr/share/igor/models/human/IGL/ref_genome/genomicVs.fasta
- /usr/share/igor/models/human/bcr_heavy/model.info
- /usr/share/igor/models/human/bcr_heavy/models/model_marginals.txt
- /usr/share/igor/models/human/bcr_heavy/models/model_parms.txt
- /usr/share/igor/models/human/bcr_heavy/ref_genome/J_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/bcr_heavy/ref_genome/V_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/bcr_heavy/ref_genome/genomicDs.fasta
- /usr/share/igor/models/human/bcr_heavy/ref_genome/genomicJs.fasta
- /usr/share/igor/models/human/bcr_heavy/ref_genome/genomicVs.fasta
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_D_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_J_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_V_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_D_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_J_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_V_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_D_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_J_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_V_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_D_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_J_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_V_hyperm_parms.txt
- /usr/share/igor/models/human/bcr_heavy/supplementary_models/models.info
- /usr/share/igor/models/human/tcr_alpha/model.info
- /usr/share/igor/models/human/tcr_alpha/models/model_marginals.txt
- /usr/share/igor/models/human/tcr_alpha/models/model_parms.txt
- /usr/share/igor/models/human/tcr_alpha/ref_genome/J_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/tcr_alpha/ref_genome/V_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/tcr_alpha/ref_genome/genomicJs.fasta
- /usr/share/igor/models/human/tcr_alpha/ref_genome/genomicVs.fasta
- /usr/share/igor/models/human/tcr_beta/model.info
- /usr/share/igor/models/human/tcr_beta/models/model_marginals.txt
- /usr/share/igor/models/human/tcr_beta/models/model_parms.txt
- /usr/share/igor/models/human/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
- /usr/share/igor/models/human/tcr_beta/ref_genome/genomicDs.fasta
- /usr/share/igor/models/human/tcr_beta/ref_genome/genomicJs.fasta
- /usr/share/igor/models/human/tcr_beta/ref_genome/genomicVs.fasta
- /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_marginals.txt
- /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_parms.txt
- /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/model.info
- /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_marginals.txt
- /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_parms.txt
- /usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/model.info
- /usr/share/igor/models/mouse/tcr_beta/model.info
- /usr/share/igor/models/mouse/tcr_beta/models/model_marginals.txt
- /usr/share/igor/models/mouse/tcr_beta/models/model_parms.txt
- /usr/share/igor/models/mouse/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
- /usr/share/igor/models/mouse/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
- /usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicDs.fasta
- /usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicJs.fasta
- /usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicVs.fasta
- /usr/share/man/man1/igor.1.gz