Package - hinge

Package: hinge
apt-get install hinge

Manuals in package:

hinge(1)

Documentations in package:

hinge

Primary informations

Download package: http://deb.debian.org/debian/pool/main/h/hinge/hinge_0.5.0-7+b3_amd64.deb (Size: 466.2KiB)

Property	Value
Package	hinge
Source	hinge (0.5.0-7)
Version	0.5.0-7+b3
Installed-Size	3096
Maintainer	Debian Med Packaging Team
Architecture	amd64
Depends	libc6 (>= 2.38), libfmt10 (>= 10.1.1+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib
Description	long read genome assembler based on hinging
Description-md5	796f6bb30e0dd11acb73bb5eeeaf4c08
Homepage	https://github.com/HingeAssembler/HINGE
Section	science
Priority	optional
Filename	pool/main/h/hinge/hinge_0.5.0-7+b3_amd64.deb
Size	477416
MD5sum	6cb86b393d16f7bd532afd92345c2246
SHA256	1c5d68715adc3b49c32dbadbd23a1899b2bbac8d712abf8f4a66d4ad8d7c8c68

Files in package

/usr/bin/hinge
/usr/lib/hinge/Reads_filter
/usr/lib/hinge/Visualise_graph.py
/usr/lib/hinge/add_groundtruth.py
/usr/lib/hinge/add_groundtruth_json.py
/usr/lib/hinge/clip_ends.py
/usr/lib/hinge/compute_n50_from_draft.py
/usr/lib/hinge/condense_graph.py
/usr/lib/hinge/condense_graph_and_annotate.py
/usr/lib/hinge/condense_graph_annotate_clip_ends.py
/usr/lib/hinge/condense_graph_create_gfa_compute_n50.py
/usr/lib/hinge/condense_graph_with_gt.py
/usr/lib/hinge/connected.py
/usr/lib/hinge/consensus
/usr/lib/hinge/correct_head.py
/usr/lib/hinge/create_bandage_file.py
/usr/lib/hinge/create_hgraph.py
/usr/lib/hinge/create_hgraph_nogt.py
/usr/lib/hinge/download_NCTC_pipeline.py
/usr/lib/hinge/draft_assembly
/usr/lib/hinge/draft_assembly.py
/usr/lib/hinge/draft_assembly_not_perfect.py
/usr/lib/hinge/draw2.py
/usr/lib/hinge/draw2_pileup.py
/usr/lib/hinge/draw2_pileup_region.py
/usr/lib/hinge/draw2_pileup_w_repeat.py
/usr/lib/hinge/draw_pileup_region.py
/usr/lib/hinge/draw_pileup_region_find_bridges.py
/usr/lib/hinge/fasta_to_fastq.py
/usr/lib/hinge/get_NCTC_json.py
/usr/lib/hinge/get_consensus_gfa.py
/usr/lib/hinge/get_draft_annotation.py
/usr/lib/hinge/get_draft_path.py
/usr/lib/hinge/get_draft_path_norevcomp.py
/usr/lib/hinge/get_maximal_reads
/usr/lib/hinge/get_single_strand.py
/usr/lib/hinge/hinging
/usr/lib/hinge/interface_utils.py
/usr/lib/hinge/longest_path.py
/usr/lib/hinge/merge_hinges.py
/usr/lib/hinge/parallel_draw.sh
/usr/lib/hinge/parallel_draw_large.sh
/usr/lib/hinge/parse.py
/usr/lib/hinge/parse_alignment.py
/usr/lib/hinge/parse_qv.py
/usr/lib/hinge/parse_read.py
/usr/lib/hinge/pileup.ipynb
/usr/lib/hinge/pipeline_consensus.py
/usr/lib/hinge/pipeline_consensus_norevcomp.py
/usr/lib/hinge/pipeline_nctc.py
/usr/lib/hinge/pruning_and_clipping.py
/usr/lib/hinge/pruning_and_clipping_nanopore.py
/usr/lib/hinge/random_condensation.py
/usr/lib/hinge/repeat_annotate_reads.py
/usr/lib/hinge/run_mapping.py
/usr/lib/hinge/run_mapping2.py
/usr/lib/hinge/run_mapping3.py
/usr/lib/hinge/run_parse_alignment.py
/usr/lib/hinge/run_parse_read.py
/usr/lib/hinge/split_las.py
/usr/lib/hinge/unitig.py
/usr/share/doc/hinge/README.md.gz
/usr/share/doc/hinge/changelog.Debian.amd64.gz
/usr/share/doc/hinge/changelog.Debian.gz
/usr/share/doc/hinge/copyright
/usr/share/doc/hinge/examples/demo/NCTC9657_demo/run.sh
/usr/share/doc/hinge/examples/demo/ecoli_P4_demo/run.sh
/usr/share/doc/hinge/examples/demo/ecoli_demo/run.sh
/usr/share/doc/hinge/examples/demo/ecoli_demo/run_norevcomp.sh
/usr/share/doc/hinge/examples/demo/ecoli_nanopore/run.sh
/usr/share/doc/hinge/examples/demo/yeast_W303_demo/nominal.ini
/usr/share/doc/hinge/examples/demo/yeast_W303_demo/run.sh
/usr/share/doc/hinge/examples/utils/nominal.ini
/usr/share/doc/hinge/parameter_description.md.gz
/usr/share/man/man1/hinge.1.gz