Package - hhsuite

Package: hhsuite
apt-get install hhsuite

Manuals in package:

Documentations in package:

hhsuite

Primary informations

Download package: http://deb.debian.org/debian/pool/main/h/hhsuite/hhsuite_3.3.0+ds-8+b3_amd64.deb (Size: 53.6MiB)

Property	Value
Package	hhsuite
Source	hhsuite (3.3.0+ds-8)
Version	3.3.0+ds-8+b3
Installed-Size	467536
Maintainer	Debian Med Packaging Team
Architecture	amd64
Depends	libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 14), perl:any, hhsuite-data (= 3.3.0+ds-8), python3
Conflicts	ffindex
Description	sensitive protein sequence searching based on HMM-HMM alignment
Description-md5	33cb7e8c769908e574aec96cb70eb73a
Homepage	https://toolkit.tuebingen.mpg.de/
Built-Using	simde (= 0.8.2-3)
Section	science
Priority	optional
Filename	pool/main/h/hhsuite/hhsuite_3.3.0+ds-8+b3_amd64.deb
Size	56204352
MD5sum	2a2433a80b231c0371e799cc283baafb
SHA256	8c4d7307ef53215b9c6eb6a312898b6e2b7dbec5f4aadca71115cb1ff42d6630

Files in package

/usr/bin/a3m_database_extract
/usr/bin/a3m_database_filter
/usr/bin/a3m_database_reduce
/usr/bin/a3m_extract
/usr/bin/a3m_reduce
/usr/bin/ffindex_apply
/usr/bin/ffindex_build
/usr/bin/ffindex_from_fasta
/usr/bin/ffindex_from_fasta_with_split
/usr/bin/ffindex_get
/usr/bin/ffindex_modify
/usr/bin/ffindex_order
/usr/bin/ffindex_reduce
/usr/bin/ffindex_unpack
/usr/bin/hhalign
/usr/bin/hhalign_omp
/usr/bin/hhblits
/usr/bin/hhblits_ca3m
/usr/bin/hhblits_omp
/usr/bin/hhconsensus
/usr/bin/hhfilter
/usr/bin/hhmake
/usr/bin/hhsearch
/usr/bin/hhsearch_omp
/usr/lib/hh
/usr/lib/hhsuite/data/do_not_delete
/usr/lib/hhsuite/data/do_not_delete.phr
/usr/lib/hhsuite/data/do_not_delete.pin
/usr/lib/hhsuite/data/do_not_delete.psq
/usr/lib/hhsuite/scripts
/usr/libexec/hhsuite/a3m_database_extract-avx
/usr/libexec/hhsuite/a3m_database_extract-avx2
/usr/libexec/hhsuite/a3m_database_extract-plain
/usr/libexec/hhsuite/a3m_database_extract-sse3
/usr/libexec/hhsuite/a3m_database_extract-sse4.1
/usr/libexec/hhsuite/a3m_database_extract-ssse3
/usr/libexec/hhsuite/a3m_database_filter-avx
/usr/libexec/hhsuite/a3m_database_filter-avx2
/usr/libexec/hhsuite/a3m_database_filter-plain
/usr/libexec/hhsuite/a3m_database_filter-sse3
/usr/libexec/hhsuite/a3m_database_filter-sse4.1
/usr/libexec/hhsuite/a3m_database_filter-ssse3
/usr/libexec/hhsuite/a3m_database_reduce-avx
/usr/libexec/hhsuite/a3m_database_reduce-avx2
/usr/libexec/hhsuite/a3m_database_reduce-plain
/usr/libexec/hhsuite/a3m_database_reduce-sse3
/usr/libexec/hhsuite/a3m_database_reduce-sse4.1
/usr/libexec/hhsuite/a3m_database_reduce-ssse3
/usr/libexec/hhsuite/a3m_extract-avx
/usr/libexec/hhsuite/a3m_extract-avx2
/usr/libexec/hhsuite/a3m_extract-plain
/usr/libexec/hhsuite/a3m_extract-sse3
/usr/libexec/hhsuite/a3m_extract-sse4.1
/usr/libexec/hhsuite/a3m_extract-ssse3
/usr/libexec/hhsuite/a3m_reduce-avx
/usr/libexec/hhsuite/a3m_reduce-avx2
/usr/libexec/hhsuite/a3m_reduce-plain
/usr/libexec/hhsuite/a3m_reduce-sse3
/usr/libexec/hhsuite/a3m_reduce-sse4.1
/usr/libexec/hhsuite/a3m_reduce-ssse3
/usr/libexec/hhsuite/bin/cstranslate
/usr/libexec/hhsuite/cstranslate-avx
/usr/libexec/hhsuite/cstranslate-avx2
/usr/libexec/hhsuite/cstranslate-plain
/usr/libexec/hhsuite/cstranslate-sse3
/usr/libexec/hhsuite/cstranslate-sse4.1
/usr/libexec/hhsuite/cstranslate-ssse3
/usr/libexec/hhsuite/hhalign-avx
/usr/libexec/hhsuite/hhalign-avx2
/usr/libexec/hhsuite/hhalign-plain
/usr/libexec/hhsuite/hhalign-sse3
/usr/libexec/hhsuite/hhalign-sse4.1
/usr/libexec/hhsuite/hhalign-ssse3
/usr/libexec/hhsuite/hhalign_omp-avx
/usr/libexec/hhsuite/hhalign_omp-avx2
/usr/libexec/hhsuite/hhalign_omp-plain
/usr/libexec/hhsuite/hhalign_omp-sse3
/usr/libexec/hhsuite/hhalign_omp-sse4.1
/usr/libexec/hhsuite/hhalign_omp-ssse3
/usr/libexec/hhsuite/hhblits-avx
/usr/libexec/hhsuite/hhblits-avx2
/usr/libexec/hhsuite/hhblits-plain
/usr/libexec/hhsuite/hhblits-sse3
/usr/libexec/hhsuite/hhblits-sse4.1
/usr/libexec/hhsuite/hhblits-ssse3
/usr/libexec/hhsuite/hhblits_ca3m-avx
/usr/libexec/hhsuite/hhblits_ca3m-avx2
/usr/libexec/hhsuite/hhblits_ca3m-plain
/usr/libexec/hhsuite/hhblits_ca3m-sse3
/usr/libexec/hhsuite/hhblits_ca3m-sse4.1
/usr/libexec/hhsuite/hhblits_ca3m-ssse3
/usr/libexec/hhsuite/hhblits_omp-avx
/usr/libexec/hhsuite/hhblits_omp-avx2
/usr/libexec/hhsuite/hhblits_omp-plain
/usr/libexec/hhsuite/hhblits_omp-sse3
/usr/libexec/hhsuite/hhblits_omp-sse4.1
/usr/libexec/hhsuite/hhblits_omp-ssse3
/usr/libexec/hhsuite/hhconsensus-avx
/usr/libexec/hhsuite/hhconsensus-avx2
/usr/libexec/hhsuite/hhconsensus-plain
/usr/libexec/hhsuite/hhconsensus-sse3
/usr/libexec/hhsuite/hhconsensus-sse4.1
/usr/libexec/hhsuite/hhconsensus-ssse3
/usr/libexec/hhsuite/hhfilter-avx
/usr/libexec/hhsuite/hhfilter-avx2
/usr/libexec/hhsuite/hhfilter-plain
/usr/libexec/hhsuite/hhfilter-sse3
/usr/libexec/hhsuite/hhfilter-sse4.1
/usr/libexec/hhsuite/hhfilter-ssse3
/usr/libexec/hhsuite/hhmake-avx
/usr/libexec/hhsuite/hhmake-avx2
/usr/libexec/hhsuite/hhmake-plain
/usr/libexec/hhsuite/hhmake-sse3
/usr/libexec/hhsuite/hhmake-sse4.1
/usr/libexec/hhsuite/hhmake-ssse3
/usr/libexec/hhsuite/hhsearch-avx
/usr/libexec/hhsuite/hhsearch-avx2
/usr/libexec/hhsuite/hhsearch-plain
/usr/libexec/hhsuite/hhsearch-sse3
/usr/libexec/hhsuite/hhsearch-sse4.1
/usr/libexec/hhsuite/hhsearch-ssse3
/usr/libexec/hhsuite/hhsearch_omp-avx
/usr/libexec/hhsuite/hhsearch_omp-avx2
/usr/libexec/hhsuite/hhsearch_omp-plain
/usr/libexec/hhsuite/hhsearch_omp-sse3
/usr/libexec/hhsuite/hhsearch_omp-sse4.1
/usr/libexec/hhsuite/hhsearch_omp-ssse3
/usr/libexec/hhsuite/simd-dispatch
/usr/share/doc/hhsuite/README.md.gz
/usr/share/doc/hhsuite/changelog.Debian.amd64.gz
/usr/share/doc/hhsuite/changelog.Debian.gz
/usr/share/doc/hhsuite/copyright
/usr/share/doc/hhsuite/examples/query.a3m
/usr/share/doc/hhsuite/examples/query.hhm
/usr/share/doc/hhsuite/examples/query.hhr
/usr/share/doc/hhsuite/examples/query.seq
/usr/share/hhsuite/scripts/Align.pm
/usr/share/hhsuite/scripts/HHPaths.pm
/usr/share/hhsuite/scripts/a3m.py
/usr/share/hhsuite/scripts/addss.pl
/usr/share/hhsuite/scripts/check_a3m.py
/usr/share/hhsuite/scripts/cif2fasta.py
/usr/share/hhsuite/scripts/create_profile_from_hhm.pl
/usr/share/hhsuite/scripts/create_profile_from_hmmer.pl
/usr/share/hhsuite/scripts/ffindex.py
/usr/share/hhsuite/scripts/get_a3m_size.py
/usr/share/hhsuite/scripts/hh_reader.py
/usr/share/hhsuite/scripts/hhmakemodel.pl
/usr/share/hhsuite/scripts/hhmakemodel.py
/usr/share/hhsuite/scripts/hhsuitedb.py
/usr/share/hhsuite/scripts/mergeali.pl
/usr/share/hhsuite/scripts/multithread.pl
/usr/share/hhsuite/scripts/pdb2fasta.pl
/usr/share/hhsuite/scripts/pdbfilter.pl
/usr/share/hhsuite/scripts/pdbfilter.py
/usr/share/hhsuite/scripts/reformat.pl
/usr/share/hhsuite/scripts/renumberpdb.pl
/usr/share/hhsuite/scripts/splitfasta.pl
/usr/share/man/man1/hhalign.1.gz
/usr/share/man/man1/hhblits.1.gz
/usr/share/man/man1/hhblits_omp.1.gz
/usr/share/man/man1/hhconsensus.1.gz
/usr/share/man/man1/hhfilter.1.gz
/usr/share/man/man1/hhmake.1.gz
/usr/share/man/man1/hhsearch.1.gz