Package - cd-hit

Package:  cd-hit
apt-get install cd-hit

Primary informations

Download package: http://deb.debian.org/debian/pool/main/c/cd-hit/cd-hit_4.8.1-4_amd64.deb (Size: 510.3KiB)

PropertyValue
Packagecd-hit
Version4.8.1-4
Installed-Size1411
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.14), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), perl:any
Descriptionsuite of programs designed to quickly group sequences
Description-md5ad9ee03ef4098028c26f1091e913dcda
Homepagehttp://weizhongli-lab.org/cd-hit/
Tagfield::biology, field::biology:bioinformatics, implemented-in::c++, implemented-in::perl, interface::commandline, role::program, use::comparing, works-with::biological-sequence
Sectionscience
Priorityoptional
Filenamepool/main/c/cd-hit/cd-hit_4.8.1-4_amd64.deb
Size522500
MD5sumc2d049b8c4f4c81298a2a1a884b690db
SHA256af974b29d1037a0c52d4cb211507af0d260a66c44701bc63174e4f79fd356807

Files in package

  • /usr/bin/cd-hit
  • /usr/bin/cd-hit-2d
  • /usr/bin/cd-hit-2d-para
  • /usr/bin/cd-hit-454
  • /usr/bin/cd-hit-div
  • /usr/bin/cd-hit-est
  • /usr/bin/cd-hit-est-2d
  • /usr/bin/cd-hit-para
  • /usr/bin/cdhit
  • /usr/bin/cdhit-2d
  • /usr/bin/cdhit-454
  • /usr/bin/cdhit-est
  • /usr/bin/cdhit-est-2d
  • /usr/bin/clstr2tree
  • /usr/bin/clstr_merge
  • /usr/bin/clstr_merge_noorder
  • /usr/bin/clstr_reduce
  • /usr/bin/clstr_renumber
  • /usr/bin/clstr_rev
  • /usr/bin/clstr_sort_by
  • /usr/bin/clstr_sort_prot_by
  • /usr/bin/make_multi_seq
  • /usr/lib/cd-hit/FET.pl
  • /usr/lib/cd-hit/cd-hit
  • /usr/lib/cd-hit/cd-hit-2d
  • /usr/lib/cd-hit/cd-hit-2d-para.pl
  • /usr/lib/cd-hit/cd-hit-454
  • /usr/lib/cd-hit/cd-hit-clstr_2_blm8.pl
  • /usr/lib/cd-hit/cd-hit-div
  • /usr/lib/cd-hit/cd-hit-div.pl
  • /usr/lib/cd-hit/cd-hit-est
  • /usr/lib/cd-hit/cd-hit-est-2d
  • /usr/lib/cd-hit/cd-hit-para.pl
  • /usr/lib/cd-hit/clstr2tree.pl
  • /usr/lib/cd-hit/clstr2txt.pl
  • /usr/lib/cd-hit/clstr2xml.pl
  • /usr/lib/cd-hit/clstr_cut.pl
  • /usr/lib/cd-hit/clstr_list.pl
  • /usr/lib/cd-hit/clstr_list_sort.pl
  • /usr/lib/cd-hit/clstr_merge.pl
  • /usr/lib/cd-hit/clstr_merge_noorder.pl
  • /usr/lib/cd-hit/clstr_quality_eval.pl
  • /usr/lib/cd-hit/clstr_quality_eval_by_link.pl
  • /usr/lib/cd-hit/clstr_reduce.pl
  • /usr/lib/cd-hit/clstr_renumber.pl
  • /usr/lib/cd-hit/clstr_rep.pl
  • /usr/lib/cd-hit/clstr_reps_faa_rev.pl
  • /usr/lib/cd-hit/clstr_rev.pl
  • /usr/lib/cd-hit/clstr_select.pl
  • /usr/lib/cd-hit/clstr_select_rep.pl
  • /usr/lib/cd-hit/clstr_size_histogram.pl
  • /usr/lib/cd-hit/clstr_size_stat.pl
  • /usr/lib/cd-hit/clstr_sort_by.pl
  • /usr/lib/cd-hit/clstr_sort_prot_by.pl
  • /usr/lib/cd-hit/clstr_sql_tbl.pl
  • /usr/lib/cd-hit/clstr_sql_tbl_sort.pl
  • /usr/lib/cd-hit/make_multi_seq.pl
  • /usr/lib/cd-hit/plot_2d.pl
  • /usr/lib/cd-hit/plot_len1.pl
  • /usr/share/doc-base/cd-hit.cd-hit
  • /usr/share/doc/cd-hit/README.Debian
  • /usr/share/doc/cd-hit/cdhit-user-guide.pdf
  • /usr/share/doc/cd-hit/changelog.Debian.gz
  • /usr/share/doc/cd-hit/changelog.gz
  • /usr/share/doc/cd-hit/copyright
  • /usr/share/doc/cd-hit/examples/example.fa
  • /usr/share/man/man1/cd-hit-2d-para.1.gz
  • /usr/share/man/man1/cd-hit-2d.1.gz
  • /usr/share/man/man1/cd-hit-454.1.gz
  • /usr/share/man/man1/cd-hit-div.1.gz
  • /usr/share/man/man1/cd-hit-est-2d.1.gz
  • /usr/share/man/man1/cd-hit-est.1.gz
  • /usr/share/man/man1/cd-hit-para.1.gz
  • /usr/share/man/man1/cd-hit.1.gz