Package - bioperl-run

Package:  bioperl-run
apt-get install bioperl-run

Primary informations

Download package: http://deb.debian.org/debian/pool/main/b/bioperl-run/bioperl-run_1.7.3-13_all.deb (Size: 35.6KiB)

PropertyValue
Packagebioperl-run
Version1.7.3-13
Installed-Size89
MaintainerDebian Med Packaging Team
Architectureall
Dependsperl:any, bioperl (>= 1.7.4), libbio-perl-run-perl (= 1.7.3-13), libbio-featureio-perl, libbio-cluster-perl, libtest-requiresinternet-perl, libbio-eutilities-perl, libbio-tools-run-remoteblast-perl, libsoap-lite-perl, default-jdk-headless
Recommendsamap-align, ncbi-blast+-legacy, bwa, exonerate, kalign, maq, mafft, muscle, ncoils, phylip, primer3, probalign, probcons, raxml, sim4, t-coffee, wise, lagan, pal2nal
Suggestsgmap, fasta3, trnascan-se, bedtools, bowtie, clustalw, emboss, hmmer, hyphy-pt | hyphy-mpi, infernal, libbio-tools-run-alignment-clustalw-perl, pftools, phyml, samtools, tigr-glimmer
DescriptionBioPerl wrappers: scripts
Description-md57ae0a3a7ce278987fe66fde47a91ee2f
Homepagehttps://metacpan.org/release/BioPerl-Run
Tagfield::biology, field::biology:bioinformatics, implemented-in::perl, interface::commandline, role::program
Sectionscience
Priorityoptional
Filenamepool/main/b/bioperl-run/bioperl-run_1.7.3-13_all.deb
Size36432
MD5sum7396c72f750bef0ae2fe55333295eee0
SHA25618fdd1bace57347f20349fae3b8524e28971c4297c7552aaf0120df04cf1b8e0

Files in package

  • /usr/bin/bp_multi_hmmsearch.pl
  • /usr/bin/bp_panalysis.pl
  • /usr/bin/bp_papplmaker.pl
  • /usr/bin/bp_run_neighbor.pl
  • /usr/bin/bp_run_protdist.pl
  • /usr/share/doc/bioperl-run/README.Debian
  • /usr/share/doc/bioperl-run/changelog.Debian.gz
  • /usr/share/doc/bioperl-run/changelog.gz
  • /usr/share/doc/bioperl-run/copyright
  • /usr/share/lintian/overrides/bioperl-run
  • /usr/share/man/man1/bp_multi_hmmsearch.pl.1p.gz
  • /usr/share/man/man1/bp_panalysis.pl.1p.gz
  • /usr/share/man/man1/bp_papplmaker.pl.1p.gz
  • /usr/share/man/man1/bp_run_neighbor.pl.1p.gz
  • /usr/share/man/man1/bp_run_protdist.pl.1p.gz