Package - bio-tradis

Package:  bio-tradis
apt-get install bio-tradis
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/b/bio-tradis/bio-tradis_1.4.5+dfsg2-2_all.deb (Size: 78.5KiB)

PropertyValue
Packagebio-tradis
Version1.4.5+dfsg2-2
Installed-Size244
MaintainerDebian Med Packaging Team
Architectureall
Dependsperl:any, libbio-perl-perl, libexception-class-perl, libmoose-perl, libtext-csv-perl, libtry-tiny-perl, smalt, samtools, tabix, r-base-core, r-cran-getopt, r-cran-mass
Recommendsartemis, r-bioc-edger
Descriptionanalyse the output from TraDIS analyses of genomic sequences
Description-md5ca2a4f3e521e51ca04cc5d201dc14492
Homepagehttps://github.com/sanger-pathogens/Bio-Tradis
Sectionperl
Priorityoptional
Filenamepool/main/b/bio-tradis/bio-tradis_1.4.5+dfsg2-2_all.deb
Size80344
MD5sum0a68231f2b8c136a1ebcf01e3eac28f3
SHA256c3e58470fcd4828ba9915419537ae78020822b5fe0180b599ab622ddf585e08b

Files in package

  • /usr/bin/add_tradis_tags
  • /usr/bin/bacteria_tradis
  • /usr/bin/check_tradis_tags
  • /usr/bin/combine_tradis_plots
  • /usr/bin/filter_tradis_tags
  • /usr/bin/remove_tradis_tags
  • /usr/bin/tradis_comparison
  • /usr/bin/tradis_essentiality
  • /usr/bin/tradis_gene_insert_sites
  • /usr/bin/tradis_merge_plots
  • /usr/bin/tradis_plot
  • /usr/share/doc/bio-tradis/README.Debian
  • /usr/share/doc/bio-tradis/README.md.gz
  • /usr/share/doc/bio-tradis/changelog.Debian.gz
  • /usr/share/doc/bio-tradis/changelog.gz
  • /usr/share/doc/bio-tradis/copyright
  • /usr/share/man/man1/add_tradis_tags.1p.gz
  • /usr/share/man/man1/bacteria_tradis.1p.gz
  • /usr/share/man/man1/check_tradis_tags.1p.gz
  • /usr/share/man/man1/combine_tradis_plots.1p.gz
  • /usr/share/man/man1/filter_tradis_tags.1p.gz
  • /usr/share/man/man1/remove_tradis_tags.1p.gz
  • /usr/share/man/man1/tradis_comparison.1.gz
  • /usr/share/man/man1/tradis_essentiality.1.gz
  • /usr/share/man/man1/tradis_gene_insert_sites.1p.gz
  • /usr/share/man/man1/tradis_merge_plots.1.gz
  • /usr/share/man/man1/tradis_plot.1p.gz
  • /usr/share/man/man3/Bio::Tradis.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::AddTagsToSeq.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Analysis::Exceptions.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Analysis::InsertSite.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CombinePlots.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::AddTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::CheckTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::FilterFastqTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::PlotCombine.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::PlotTradis.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::RemoveFastqTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::RunMapping.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::TradisAnalysis.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::CommandLine::TradisBam.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::DetectTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Exception.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::FilterTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Map.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Parser::Bam.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Parser::Cigar.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Parser::Fastq.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::RemoveTags.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::RunTradis.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::Samtools.3pm.gz
  • /usr/share/man/man3/Bio::Tradis::TradisPlot.3pm.gz
  • /usr/share/perl5/Bio/Tradis.pm
  • /usr/share/perl5/Bio/Tradis/AddTagsToSeq.pm
  • /usr/share/perl5/Bio/Tradis/Analysis/Exceptions.pm
  • /usr/share/perl5/Bio/Tradis/Analysis/InsertSite.pm
  • /usr/share/perl5/Bio/Tradis/CombinePlots.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/AddTags.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/CheckTags.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/FilterFastqTags.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/PlotCombine.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/PlotTradis.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/RemoveFastqTags.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/RunMapping.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/TradisAnalysis.pm
  • /usr/share/perl5/Bio/Tradis/CommandLine/TradisBam.pm
  • /usr/share/perl5/Bio/Tradis/DetectTags.pm
  • /usr/share/perl5/Bio/Tradis/Exception.pm
  • /usr/share/perl5/Bio/Tradis/FilterTags.pm
  • /usr/share/perl5/Bio/Tradis/Map.pm
  • /usr/share/perl5/Bio/Tradis/Parser/Bam.pm
  • /usr/share/perl5/Bio/Tradis/Parser/Cigar.pm
  • /usr/share/perl5/Bio/Tradis/Parser/Fastq.pm
  • /usr/share/perl5/Bio/Tradis/RemoveTags.pm
  • /usr/share/perl5/Bio/Tradis/RunTradis.pm
  • /usr/share/perl5/Bio/Tradis/Samtools.pm
  • /usr/share/perl5/Bio/Tradis/TradisPlot.pm