Package - beast-mcmc-examples

Package: beast-mcmc-examples
apt-get install beast-mcmc-examples

Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/b/beast-mcmc/beast-mcmc-examples_1.10.4+dfsg-7_all.deb (Size: 1.9MiB)

Property	Value
Package	beast-mcmc-examples
Source	beast-mcmc
Version	1.10.4+dfsg-7
Installed-Size	2221
Maintainer	Debian Med Packaging Team
Architecture	all
Enhances	beast-mcmc
Description	Bayesian MCMC phylogenetic inference - example data
Description-md5	c63bad5feea098eb39bb86db8b6f8d33
Multi-Arch	foreign
Homepage	http://beast.bio.ed.ac.uk/
Section	doc
Priority	optional
Filename	pool/main/b/beast-mcmc/beast-mcmc-examples_1.10.4+dfsg-7_all.deb
Size	2036404
MD5sum	e335f96f738e4f9daf2db9e5aa710695
SHA256	0aff7f127d4dddb4b5218d9b9399f62858e592a36f91fce967c47f49c942b2e9

Files in package

/usr/share/doc/beast-mcmc-examples/changelog.Debian.gz
/usr/share/doc/beast-mcmc-examples/copyright
/usr/share/doc/beast-mcmc/examples/Benchmarks/benchmark1.xml.gz
/usr/share/doc/beast-mcmc/examples/Benchmarks/benchmark2.xml.gz
/usr/share/doc/beast-mcmc/examples/Benchmarks/old_benchmark.xml.gz
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest1.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest2.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest3.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest4.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest5.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest6.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest7.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest8.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/constrainedTaxaTest9.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/testCalibration.xml.gz
/usr/share/doc/beast-mcmc/examples/Calibrations/test_5t_1c-pointSyntax.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/test_5t_1c_unif.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/test_5t_2c_e2.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/test_5t_2c_fp_unif.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/test_5t_5c_unif.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/test_7t_2c_4c_unif.xml
/usr/share/doc/beast-mcmc/examples/Calibrations/test_7t_2c_7c_unif.xml
/usr/share/doc/beast-mcmc/examples/ContinuousTraits/DarwinsFinches.nex.gz
/usr/share/doc/beast-mcmc/examples/ContinuousTraits/DarwinsFinchesTraits.txt
/usr/share/doc/beast-mcmc/examples/ContinuousTraits/racoon_rabies.xml.gz
/usr/share/doc/beast-mcmc/examples/ContinuousTraits/racoon_rabies_locations.txt
/usr/share/doc/beast-mcmc/examples/Data/Darwins-finches.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/Dengue4.env.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/H1N1_HA.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/Primates_starting_tree.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/Primates_two_partition.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/Shankarappa.Patient9.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/YFV.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/anolis.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/apes.nex.gz
/usr/share/doc/beast-mcmc/examples/Data/microsatellite_data.txt
/usr/share/doc/beast-mcmc/examples/DiscreteTraits/H5N1_HA.nex.gz
/usr/share/doc/beast-mcmc/examples/DiscreteTraits/phylogeneticGLM/batRABV.fas.gz
/usr/share/doc/beast-mcmc/examples/DiscreteTraits/phylogeneticGLM/batRABV_glm.xml.gz
/usr/share/doc/beast-mcmc/examples/DiscreteTraits/phylogeneticGLM/batRABV_hostLocation.txt.gz
/usr/share/doc/beast-mcmc/examples/DiscreteTraits/phylogeneticGLM/hostDistances.csv
/usr/share/doc/beast-mcmc/examples/DiscreteTraits/taxaLocations.txt
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/freqs_k_unrest.csv
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/freqs_zs.csv
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/inirates.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/norates.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/rates_k_unrest.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/ecmdata/rates_zs.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/pcadata/freqs.csv
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/pcadata/means.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/pcadata/pcs.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/pcadata/scales.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/codon-data/pcadata/startfacs.csv.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/testECMcodonModel.xml.gz
/usr/share/doc/beast-mcmc/examples/EmpiricalCodonModels/testPCMcodonModel.xml.gz
/usr/share/doc/beast-mcmc/examples/MDS/US_cities.txt
/usr/share/doc/beast-mcmc/examples/MDS/US_cities.xml.gz
/usr/share/doc/beast-mcmc/examples/Phylogeography/H5N1_HA_discrete.xml.gz
/usr/share/doc/beast-mcmc/examples/Phylogeography/H5N1_HA_discrete_traits.xml.gz
/usr/share/doc/beast-mcmc/examples/Phylogeography/continuous/RacRABV_LogNRRW.xml.gz
/usr/share/doc/beast-mcmc/examples/Phylogeography/continuous/RacRABV_cauchyRRW.xml.gz
/usr/share/doc/beast-mcmc/examples/Phylogeography/continuous/RacRABV_gammaRRW.xml.gz
/usr/share/doc/beast-mcmc/examples/Phylogeography/continuous/RacRABV_homogeneous.xml.gz
/usr/share/doc/beast-mcmc/examples/Recombination/arg-ecoli.xml.gz
/usr/share/doc/beast-mcmc/examples/Recombination/arg-lepto.xml.gz
/usr/share/doc/beast-mcmc/examples/Recombination/arg-rokas.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testFixedLocalClock.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testRandomLocalClock.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testStrictClock.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testStrictClockNoDate.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testStrictClockNoDate2.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testStrictClockTipDatesSampling.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testStrictClockTipTime.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testUCRelaxedClockContinuousQuantileLogNormal.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testUCRelaxedClockGamma.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/ClockModels/testUCRelaxedClockLogNormal.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/SubstModels/testSRD06CP12_3.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/SubstModels/testSiteModelAlpha.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/BayesianSkyline+unccorelatedExp.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/GMRFBayesianSkyride+strict
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/Yule+unccorelatedExp.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/birthDeath+unccorelatedLn.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/constant+uncorrelatedExp.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/expansionDoubling+strict.xml.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/exponentialDoubling+strict.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors+ClockModels/extendedBayesianSkyline+uncorrelatedLn.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testBSP.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testBSP1.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testBSPNoClock.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testBirthDeathAsYule.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testBirthDeathModel_10taxa.xml
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testCataclysmCoalescent.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testCoalescent.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testCoalescentNoClock.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testCoalescentNoClock1.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testEBSP.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testExponentialGrowth.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testGMRFCoalescent.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testLinearBSP.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testPiecewiseExponential.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testYule.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testYuleCase3.xml
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testYuleModel.xml
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testYuleModel_10taxa.xml
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testYuleOneSite.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/TreePriors/testYulePrior.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testAddPatterns.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testAddPatterns2.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testAlignmentStatistics.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testAncestralReconstruction.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testAscertainment.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testAutocorrelatedRelaxedClock.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testBinaryDollo.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testCodonLikelihood.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testComparativeMethod.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testDriftDiffusion.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testFullConditionals.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testGaussianProcessFromTree.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testGoudllersSmallprob.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testGradients.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testIntegratedFactorModel.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testJointInternalSample.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testJointTipAges.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testLatentLiability.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testLewisMk.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testLikelihood.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testLognormalPrior.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testMC3.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMCMC.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testML.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMSSD.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMVN.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMVOU.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMarkovJumps.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testMissingIntegratedTraitLikelihood.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testMissingTraits.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMixedModel.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMultiThreading.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMvnHmc.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testMvnHmcCompare.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testNormalModelEllipticalSliceSampler.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testNormalModelGibbs.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testPMD.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testPopTreeModel.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testPosteriorIBD.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testRestrictedAncestralReconstruction.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testRestrictedPartials.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testSequenceSimulator.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testSimplePathSampling.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testStarTreeTest.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testStarTreeTest2.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testTipDatePrecision.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testTransmissionStatistic.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testTransposedMatrixParameter.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testTreePathSampling.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testTruncatedNormal.xml
/usr/share/doc/beast-mcmc/examples/TestXML/testTruncatedNormal15dimension.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testUncertainSequences.xml.gz
/usr/share/doc/beast-mcmc/examples/TestXML/testUniformizedMarkovJumps.xml
/usr/share/doc/beast-mcmc/examples/test.sh