Package - atac

Package:  atac
apt-get install atac
Manuals in package:
Documentations in package:

Primary informations

Download package: http://deb.debian.org/debian/pool/main/k/kmer/atac_0~20150903+r2013-9+b1_amd64.deb (Size: 378.8KiB)

PropertyValue
Packageatac
Sourcekmer (0~20150903+r2013-9)
Version0~20150903+r2013-9+b1
Installed-Size2789
MaintainerDebian Med Packaging Team
Architectureamd64
Dependslibc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), python3 (<< 3.14), python3 (>= 3.13~), python3.13, python3:any, perl:any, libfile-which-perl, leaff, meryl, gnuplot
Recommendskmer-examples
Descriptiongenome assembly-to-assembly comparison
Description-md57c0df19216e3aa53e4831aab9fc46b7e
Homepagehttp://kmer.sourceforge.net
Sectionscience
Priorityoptional
Filenamepool/main/k/kmer/atac_0~20150903+r2013-9+b1_amd64.deb
Size387852
MD5sum5c0ab88c100b1b7f4e466ac53d2e60a9
SHA256ae25098799ada1148a279156138aa133fc52880330c19c1edf70f4d4c3976281

Files in package

  • /usr/bin/atac
  • /usr/lib/atac/bin/AtacDriver.py
  • /usr/lib/atac/bin/cleanAtac
  • /usr/lib/atac/bin/clumpMaker
  • /usr/lib/atac/bin/coalesceMatches
  • /usr/lib/atac/bin/correctGaps
  • /usr/lib/atac/bin/extractSequence
  • /usr/lib/atac/bin/extractUnmapped
  • /usr/lib/atac/bin/gapShifter
  • /usr/lib/atac/bin/happy-clones-span-clumps
  • /usr/lib/atac/bin/heavychains
  • /usr/lib/atac/bin/lengthFilter
  • /usr/lib/atac/bin/makeplot.pl
  • /usr/lib/atac/bin/matchExtender
  • /usr/lib/atac/bin/mismatchCounter
  • /usr/lib/atac/bin/overlap
  • /usr/lib/atac/bin/projectFeatures
  • /usr/lib/atac/bin/seatac
  • /usr/lib/atac/bin/statsGenerator
  • /usr/lib/atac/bin/testAtac
  • /usr/lib/atac/bin/uniqueFilter
  • /usr/lib/atac/lib/AtacDriver.py
  • /usr/lib/atac/lib/AtacFile.py
  • /usr/lib/atac/lib/DNA.py
  • /usr/lib/atac/lib/IdxStore.py
  • /usr/lib/atac/lib/MatchRecord.py
  • /usr/lib/atac/lib/MyFile.py
  • /usr/lib/atac/lib/PerfectRuns.py
  • /usr/lib/atac/lib/TrimMatchOverlaps.py
  • /usr/lib/atac/lib/UniqueFilter.py
  • /usr/lib/atac/lib/dedashMatches.py
  • /usr/lib/atac/lib/fillIntraRunGaps.py
  • /usr/lib/atac/lib/filter-heavychains.so
  • /usr/lib/atac/lib/filter-nop.so
  • /usr/lib/atac/lib/halign.so
  • /usr/lib/atac/lib/localAlignerInterface.so
  • /usr/lib/atac/lib/mkstats.py
  • /usr/lib/atac/lib/squeezeIntraRunGaps.py
  • /usr/share/doc/atac/README.atac
  • /usr/share/doc/atac/README.test
  • /usr/share/doc/atac/atac-unit-test
  • /usr/share/doc/atac/changelog.Debian.amd64.gz
  • /usr/share/doc/atac/changelog.Debian.gz
  • /usr/share/doc/atac/copyright
  • /usr/share/man/man1/atac.1.gz
  • /usr/share/python3/runtime.d/atac.rtupdate