Man page - sambamba(1)

Packages contains this manual

Package:  sambamba
apt-get install sambamba

Manuals in package:
• sambamba-flagstat(1)
• sambamba-slice(1)
• sambamba-index(1)
• sambamba-view(1)
• sambamba-markdup(1)
• sambamba(1)
• sambamba-merge(1)
• sambamba-sort(1)
• sambamba-pileup(1)
Documentations in package:
• sambamba

Manual

SAMBAMBA

NAME

sambamba - toolkit for working with SAM/BAM files

SYNOPSIS

sambamba [subcommand] [arguments...]

DESCRIPTION

sambamba unifies several independent tools in one executable:

Thus available subcommands are view , index , merge , sort , markdup , flagstat , slice , and mpileup . Their use is explained on the corresponding man pages.

Note that sambamba uses all available cores by default.