Man page - prokka-hamap_to_hmm(1)

Packages contains this manual

Package:  prokka
apt-get install prokka

Manuals in package:
• prokka-genbank_to_fasta_db(1)
• prokka-biocyc_to_fasta_db(1)
• prokka-uniprot_to_fasta_db(1)
• prokka-genpept_to_fasta_db(1)
• prokka-cdd_to_hmm(1)
• prokka-clusters_to_hmm(1)
• prokka(1)
• prokka-hamap_to_hmm(1)
Documentations in package:
• prokka

Manual

PROKKA-HAMAP_TO_HMM

NAME
SYNOPSIS
DESCRIPTION

---

NAME

prokka-hamap_to_hmm - rapid annotation of prokaryotic genomes

SYNOPSIS

prokka-hamap_to_hmm [ options ] [ --datadir hamap_data_subdir ] > hamap.hmm

DESCRIPTION

--help

This help.

--verbose !

Verbose progress (default ’0’).

--datadir = s

Path to downloaded HAMAP folder (ftp://ftp.expasy.org/databases/hamap/) (default ’’).

--sep = s

Separator between EC/gene/product (default ’˜˜˜’).

--blank = s

Replace empty EC/gene/product with this (default ’’).

---