Man page - mhap(1)

Packages contains this manual

Package:  mhap
apt-get install mhap

Manuals in package:
• mhap(1)
Documentations in package:
• mhap

Manual

MHAP

NAME
SYNOPSIS
DESCRIPTION
OPTIONS

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NAME

mhap - probabilistic sequence overlapping

SYNOPSIS

mhap -s <fasta/dat from/self file> [-q<fasta/dat to file>] [-f<kmer filter list, must be sorted>]
java -server -Xmx <memory> -jar $(which mhap) -s <fasta/dat from/self file> [-q<fasta/dat to file>] [-f<kmer filter list, must be sorted>]
generate precomputed binaries:
java -server -Xmx <memory> -jar $(which mhap) -p <directory of fasta files> -q <output directory> [-f<kmer filter list, must be sorted>]

DESCRIPTION

MHAP (MinHash Alignment Protocol) is a tool for finding overlaps of long-read sequences (such as PacBio or Nanopore) in bioinformatics.

OPTIONS

-h --help

Show summary of available options.

--version

Displays the version.

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