Man page - jaligner(1)

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Package:  jaligner
apt-get install jaligner

Manuals in package:
• jaligner(1)
Documentations in package:
• jaligner

Manual

JALIGNER

NAME
SYNOPSIS
EXAMPLES
HOMEPAGE

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NAME

jaligner - Smith-Waterman algorithm with Gotoh's improvement

SYNOPSIS

jaligner <s1> <s2> <matrix> <open> <extend>

Or just type jaligner to see the GUI.

EXAMPLES

jaligner p53_{human,mouse}.fasta BLOSUM62 10 0.5

HOMEPAGE

<http://jaligner.sourceforge.net/>

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