Man page - filter_contigs(1)

Packages contains this manual

Package:  idba-extra
apt-get install idba-extra

Manuals in package:
• filter_blat(1)
• sim_reads(1)
• filter_contigs(1)
• sim_reads_tran(1)
• fq2fa(1)
Documentations in package:
• idba-extra

Manual

FILTER_CONTIGS

NAME
SYNOPSIS
DESCRIPTION
Allowed Options:
AUTHOR

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NAME

filter_contigs - Simulate sequencing reads from references.

SYNOPSIS

fq2fa tmp.fq tmp.fa [...]

DESCRIPTION

filter_contigs - Convert Fastq sequences to Fasta sequences.

fq2fa --paired tmp.fq tmp.fa fq2fa --merge tmp_1.fq tmp_2.fq tmp.fa

Allowed Options:

--min_contig arg (=100)

filter out reads containing ’N’

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.

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