Man page - dendropy-format(1)

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Package:  sumtrees
apt-get install sumtrees

Manuals in package:
• dendropy-format(1)
• sumtrees(1)
Documentations in package:
• sumtrees

Manual

dendropy-format

NAME
DESCRIPTION
options:
Source:
Destination:

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NAME

dendropy-format - convert files from one format to another

DESCRIPTION

usage: dendropy-format --from [FORMAT] --to [FORMAT] [OPTIONS] <SOURCE-FILE> > DEST-FILE

options:

-h , --help

show this help message and exit

Source:

source_file

Path to source data.

-f FORMAT, --from FORMAT

Format of data source.

-d {dna,rna,standard}, --data-type {dna,rna,standard}

Type of data

Destination:

-t FORMAT, --to FORMAT

Format of data source.

-u , --unquoted-underscores

[NEXUS/Newick:] Do not quote labels with undescores.

--recode-uncertain {missing,gap}

Recode ambiguous or uncertain characters as missing (’?’) or gaps (’-’)

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