Man page - crb-blast(1)

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Package: ruby-crb-blast
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crb-blast - Conditional Reciprocal Best BLAST

CRB-Blast v0.6.9 by Chris Boursnell <cmb211@cam.ac.uk>

Conditional Reciprocal Best BLAST

USAGE: crb-blast <options>

--query , -q <s>:

query fasta file

--target , -t <s>:

target fasta file

--evalue , -e <f>:

e-value cut off for BLAST. Format 1e-5 (default: 1.0e-05)

--threads , -h <i>:

number of threads to run BLAST with (default: 1)

--output , -o <s>:

output file as tsv

--split , -s :

split the fasta files into chunks and run multiple blast jobs and then combine them.

--verbose , -v :

be verbose

--version , -r :

Print version and exit

--help , -l :

Show this message