Man page - popt(1)

Manual

POPT

NAME
SYNOPSIS
DESCRIPTION
SEE ALSO
AUTHOR

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NAME

popt - extract Michael Zuker’s p-optimal folds from subopt output.

SYNOPSIS

RNAsubopt -s < seq | popt

DESCRIPTION

This program extracts Michael Zuker’s p-optimal folds from subopt output. prints p-optimal structures followed by the list of pairs with respect to which they are optimal. Input must be sorted by energy!

In conection with RNAfold it can be used as
RNAfold < sequence_file | b2ct > ct_file.ct

SEE ALSO

RNAsubopt(1)

AUTHOR

Ivo L. Hofacker <ivo@tbi.univie.ac.at>, Walter Fontana

perl v5.10.1 2011-02-01

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