Man page - cnv_expression_correlate(1)

Manual

CNV_EXPRESSION_CORRELATE.PY(1) User Commands CNV_EXPRESSION_CORRELATE.PY(1)

cnv_expression_correlate.py - Calculate correlation coefficients for gene expression and copy number

usage: cnv_expression_correlate.py [-h] [-o FILE] CNV_FILE RNA_FILE

Calculate correlation coefficients for gene expression and copy number. Data source for both inputs is TCGA via cBioPortal.

Gene copy number calls for many samples.
Gene expression for many samples (mostly overlapping with CNV samples).

show this help message and exit
Output file name (summary table).


This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.

July 2023 cnv_expression_correlate.py 0.9.10